Complete genome sequence of Comamonas sp. NLF-7-7 isolated from biofilter of wastewater treatment plant

Dong Hyun Kim; Kook Il Han; Hae Jun Kwon; Mi Gyeong Kim; Young Guk Kim; Doo Ho Choi; Keun Chul Lee; Min Kuk Suh; Han Sol Kim; Jung Sook Lee; Jong Guk Kim

doi:10.7845/kjm.2019.9099

Complete genome sequence of Comamonas sp. NLF-7-7 isolated from biofilter of wastewater treatment plant

Dong Hyun Kim, Kook Il Han, Hae Jun Kwon, Mi Gyeong Kim, Young Guk Kim, Doo Ho Choi, Keun Chul Lee, Min Kuk Suh, Han Sol Kim, Jung Sook Lee, Jong Guk Kim

School of Food Science & Biotechnology

Research output: Contribution to journal › Article › peer-review

3 Scopus citations

Abstract

Comamonas sp. NLF-7-7 was isolated from biofilter of wastewater treatment plant. The whole-genome sequence of Comamonas sp. NLF-7-7 was analyzed using the PacBio RS II and Illumina HiSeqXten platform. The genome comprises a 3,333,437 bp chromosome with a G + C content of 68.04%, 3,197 total genes, 9 rRNA genes, and 49 tRNA genes. This genome contained pollutants degradation and floc forming genes such as sulfur oxidization pathway (SoxY, SoxZ, SoxA, and SoxB) and floc forming pathway (EpsG, EpsE, EpsF, EpsG, EpsL, and glycosyltransferase), respectively. The Comamonas sp. NLF-7-7 can be used to the purification of wastewater.

Original language	English
Pages (from-to)	309-312
Number of pages	4
Journal	Korean Journal of Microbiology
Volume	55
Issue number	3
DOIs	https://doi.org/10.7845/kjm.2019.9099
State	Published - 2019

Keywords

Comamonas sp. NLF-7-7
Illumina HiSeqXten
PacBio RS II
Wastewater

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10.7845/kjm.2019.9099

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title = "Complete genome sequence of Comamonas sp. NLF-7-7 isolated from biofilter of wastewater treatment plant",

abstract = "Comamonas sp. NLF-7-7 was isolated from biofilter of wastewater treatment plant. The whole-genome sequence of Comamonas sp. NLF-7-7 was analyzed using the PacBio RS II and Illumina HiSeqXten platform. The genome comprises a 3,333,437 bp chromosome with a G + C content of 68.04%, 3,197 total genes, 9 rRNA genes, and 49 tRNA genes. This genome contained pollutants degradation and floc forming genes such as sulfur oxidization pathway (SoxY, SoxZ, SoxA, and SoxB) and floc forming pathway (EpsG, EpsE, EpsF, EpsG, EpsL, and glycosyltransferase), respectively. The Comamonas sp. NLF-7-7 can be used to the purification of wastewater.",

keywords = "Comamonas sp. NLF-7-7, Illumina HiSeqXten, PacBio RS II, Wastewater",

author = "Kim, {Dong Hyun} and Han, {Kook Il} and Kwon, {Hae Jun} and Kim, {Mi Gyeong} and Kim, {Young Guk} and Choi, {Doo Ho} and Lee, {Keun Chul} and Suh, {Min Kuk} and Kim, {Han Sol} and Lee, {Jung Sook} and Kim, {Jong Guk}",

note = "Publisher Copyright: {\textcopyright} 2019, The Microbiological Society of Korea.",

year = "2019",

doi = "10.7845/kjm.2019.9099",

language = "English",

volume = "55",

pages = "309--312",

journal = "Korean Journal of Microbiology",

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publisher = "Microbiological Society of Korea",

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T1 - Complete genome sequence of Comamonas sp. NLF-7-7 isolated from biofilter of wastewater treatment plant

AU - Kim, Dong Hyun

AU - Han, Kook Il

AU - Kwon, Hae Jun

AU - Kim, Mi Gyeong

AU - Kim, Young Guk

AU - Choi, Doo Ho

AU - Lee, Keun Chul

AU - Suh, Min Kuk

AU - Kim, Han Sol

AU - Lee, Jung Sook

AU - Kim, Jong Guk

PY - 2019

Y1 - 2019

N2 - Comamonas sp. NLF-7-7 was isolated from biofilter of wastewater treatment plant. The whole-genome sequence of Comamonas sp. NLF-7-7 was analyzed using the PacBio RS II and Illumina HiSeqXten platform. The genome comprises a 3,333,437 bp chromosome with a G + C content of 68.04%, 3,197 total genes, 9 rRNA genes, and 49 tRNA genes. This genome contained pollutants degradation and floc forming genes such as sulfur oxidization pathway (SoxY, SoxZ, SoxA, and SoxB) and floc forming pathway (EpsG, EpsE, EpsF, EpsG, EpsL, and glycosyltransferase), respectively. The Comamonas sp. NLF-7-7 can be used to the purification of wastewater.

AB - Comamonas sp. NLF-7-7 was isolated from biofilter of wastewater treatment plant. The whole-genome sequence of Comamonas sp. NLF-7-7 was analyzed using the PacBio RS II and Illumina HiSeqXten platform. The genome comprises a 3,333,437 bp chromosome with a G + C content of 68.04%, 3,197 total genes, 9 rRNA genes, and 49 tRNA genes. This genome contained pollutants degradation and floc forming genes such as sulfur oxidization pathway (SoxY, SoxZ, SoxA, and SoxB) and floc forming pathway (EpsG, EpsE, EpsF, EpsG, EpsL, and glycosyltransferase), respectively. The Comamonas sp. NLF-7-7 can be used to the purification of wastewater.

KW - Comamonas sp. NLF-7-7

KW - Illumina HiSeqXten

KW - PacBio RS II

KW - Wastewater

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DO - 10.7845/kjm.2019.9099

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VL - 55

SP - 309

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JO - Korean Journal of Microbiology

JF - Korean Journal of Microbiology

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ER -

Complete genome sequence of Comamonas sp. NLF-7-7 isolated from biofilter of wastewater treatment plant

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Keywords

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