Complete genome sequence of Deinococcus puniceus DY1T, a radiation resistant bacterium

Sathiyaraj Srinivasan; Eun Hwa Sohn; Hee Young Jung; Myung Kyum Kim

doi:10.7845/kjm.2018.8004

Complete genome sequence of Deinococcus puniceus DY1^T, a radiation resistant bacterium

Sathiyaraj Srinivasan
, Eun Hwa Sohn
, Hee Young Jung
, Myung Kyum Kim

Department of Plant Medicine

Seoul Women's University
Kangwon National University

Research output: Contribution to journal › Article › peer-review

Abstract

Cells of Deinococcus puniceus DY1^T are Gram-positive, coccusshaped, and crimson color-pigmented. Strain DY1^T was isolated from soil irradiated with 5 kGy gamma radiation and showed resistance to UVC and gamma radiation. In this study, we report the complete genome sequence of a bacterium Deinococcus puniceus DY1^T is consist of circular chromosome comprised of 2,971,983 bp, with the G + C content of 62.5%. The complete genome sequence was obtained using the PacBio RS II platform, it included 2,617 coding sequences (CDs), 2,762 genes, and 88 pseudogene.

Original language	English
Pages (from-to)	84-86
Number of pages	3
Journal	Korean Journal of Microbiology
Volume	54
Issue number	1
DOIs	https://doi.org/10.7845/kjm.2018.8004
State	Published - 1 Mar 2018

Keywords

Complete genome
Deinococcus
Nucleotide excision repair
PacBio RS II
Radiation resistance

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10.7845/kjm.2018.8004

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title = "Complete genome sequence of Deinococcus puniceus DY1T, a radiation resistant bacterium",

abstract = "Cells of Deinococcus puniceus DY1T are Gram-positive, coccusshaped, and crimson color-pigmented. Strain DY1T was isolated from soil irradiated with 5 kGy gamma radiation and showed resistance to UVC and gamma radiation. In this study, we report the complete genome sequence of a bacterium Deinococcus puniceus DY1T is consist of circular chromosome comprised of 2,971,983 bp, with the G + C content of 62.5\%. The complete genome sequence was obtained using the PacBio RS II platform, it included 2,617 coding sequences (CDs), 2,762 genes, and 88 pseudogene.",

keywords = "Complete genome, Deinococcus, Nucleotide excision repair, PacBio RS II, Radiation resistance",

author = "Sathiyaraj Srinivasan and Sohn, \{Eun Hwa\} and Jung, \{Hee Young\} and Kim, \{Myung Kyum\}",

note = "Publisher Copyright: {\textcopyright} 2018, The Microbiological Society of Korea.",

year = "2018",

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doi = "10.7845/kjm.2018.8004",

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T1 - Complete genome sequence of Deinococcus puniceus DY1T, a radiation resistant bacterium

AU - Srinivasan, Sathiyaraj

AU - Sohn, Eun Hwa

AU - Jung, Hee Young

AU - Kim, Myung Kyum

PY - 2018/3/1

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N2 - Cells of Deinococcus puniceus DY1T are Gram-positive, coccusshaped, and crimson color-pigmented. Strain DY1T was isolated from soil irradiated with 5 kGy gamma radiation and showed resistance to UVC and gamma radiation. In this study, we report the complete genome sequence of a bacterium Deinococcus puniceus DY1T is consist of circular chromosome comprised of 2,971,983 bp, with the G + C content of 62.5%. The complete genome sequence was obtained using the PacBio RS II platform, it included 2,617 coding sequences (CDs), 2,762 genes, and 88 pseudogene.

AB - Cells of Deinococcus puniceus DY1T are Gram-positive, coccusshaped, and crimson color-pigmented. Strain DY1T was isolated from soil irradiated with 5 kGy gamma radiation and showed resistance to UVC and gamma radiation. In this study, we report the complete genome sequence of a bacterium Deinococcus puniceus DY1T is consist of circular chromosome comprised of 2,971,983 bp, with the G + C content of 62.5%. The complete genome sequence was obtained using the PacBio RS II platform, it included 2,617 coding sequences (CDs), 2,762 genes, and 88 pseudogene.

KW - Complete genome

KW - Deinococcus

KW - Nucleotide excision repair

KW - PacBio RS II

KW - Radiation resistance

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DO - 10.7845/kjm.2018.8004

M3 - Article

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SN - 0440-2413

VL - 54

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JO - Korean Journal of Microbiology

JF - Korean Journal of Microbiology

IS - 1

ER -

Complete genome sequence of Deinococcus puniceus DY1^T, a radiation resistant bacterium

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