Complete genome sequence of Lab rys sp. KNU-23 isolated from ginseng soil in the Republic of Korea

Min Ji Kim; Yeong Jun Park; Min Kyu Park; Chang Eon Park; Young Jae Jo; Setu Bazie Tagele; Jae Ho Shin

doi:10.7845/kjm.2020.0101

Complete genome sequence of Lab rys sp. KNU-23 isolated from ginseng soil in the Republic of Korea

Min Ji Kim, Yeong Jun Park, Min Kyu Park, Chang Eon Park, Young Jae Jo, Setu Bazie Tagele, Jae Ho Shin

School of Applied Bioscience

Research output: Contribution to journal › Article › peer-review

1 Scopus citations

Abstract

Labrys sp. KNU-23 is a Gram-negative, aerobic, rod-shaped, tryptophan-producing, urea-decomposing bacterium that was isolated from ginseng soil in Bonghwa-gun, Republic of Korea. This study reports the complete genome sequence of strain KNU-23. The complete genome comprises two circular chromosomes of 5,388,854 bp and 2,162,438 bp with a GC content of 64 and 62.1%, respectively. The whole genome was predicted to have 6,868 protein coding genes. In addition, ureadecomposing and tryptophan-producing genes that are associated with plant growth-promoting activity were identified. Therefore, Labrys sp. KNU-23 is likely to be an agriculturally useful strain.

Original language	English
Pages (from-to)	410-412
Number of pages	3
Journal	Korean Journal of Microbiology
Volume	56
Issue number	4
DOIs	https://doi.org/10.7845/kjm.2020.0101
State	Published - 2020

Keywords

Labrys sp.
tryptophan
urease

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10.7845/kjm.2020.0101

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title = "Complete genome sequence of Lab rys sp. KNU-23 isolated from ginseng soil in the Republic of Korea",

abstract = "Labrys sp. KNU-23 is a Gram-negative, aerobic, rod-shaped, tryptophan-producing, urea-decomposing bacterium that was isolated from ginseng soil in Bonghwa-gun, Republic of Korea. This study reports the complete genome sequence of strain KNU-23. The complete genome comprises two circular chromosomes of 5,388,854 bp and 2,162,438 bp with a GC content of 64 and 62.1%, respectively. The whole genome was predicted to have 6,868 protein coding genes. In addition, ureadecomposing and tryptophan-producing genes that are associated with plant growth-promoting activity were identified. Therefore, Labrys sp. KNU-23 is likely to be an agriculturally useful strain.",

keywords = "Labrys sp., tryptophan, urease",

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year = "2020",

doi = "10.7845/kjm.2020.0101",

language = "English",

volume = "56",

pages = "410--412",

journal = "Korean Journal of Microbiology",

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publisher = "Microbiological Society of Korea",

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T1 - Complete genome sequence of Lab rys sp. KNU-23 isolated from ginseng soil in the Republic of Korea

AU - Kim, Min Ji

AU - Park, Yeong Jun

AU - Park, Min Kyu

AU - Park, Chang Eon

AU - Jo, Young Jae

AU - Tagele, Setu Bazie

AU - Shin, Jae Ho

PY - 2020

Y1 - 2020

N2 - Labrys sp. KNU-23 is a Gram-negative, aerobic, rod-shaped, tryptophan-producing, urea-decomposing bacterium that was isolated from ginseng soil in Bonghwa-gun, Republic of Korea. This study reports the complete genome sequence of strain KNU-23. The complete genome comprises two circular chromosomes of 5,388,854 bp and 2,162,438 bp with a GC content of 64 and 62.1%, respectively. The whole genome was predicted to have 6,868 protein coding genes. In addition, ureadecomposing and tryptophan-producing genes that are associated with plant growth-promoting activity were identified. Therefore, Labrys sp. KNU-23 is likely to be an agriculturally useful strain.

AB - Labrys sp. KNU-23 is a Gram-negative, aerobic, rod-shaped, tryptophan-producing, urea-decomposing bacterium that was isolated from ginseng soil in Bonghwa-gun, Republic of Korea. This study reports the complete genome sequence of strain KNU-23. The complete genome comprises two circular chromosomes of 5,388,854 bp and 2,162,438 bp with a GC content of 64 and 62.1%, respectively. The whole genome was predicted to have 6,868 protein coding genes. In addition, ureadecomposing and tryptophan-producing genes that are associated with plant growth-promoting activity were identified. Therefore, Labrys sp. KNU-23 is likely to be an agriculturally useful strain.

KW - Labrys sp.

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KW - urease

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DO - 10.7845/kjm.2020.0101

M3 - Article

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SN - 0440-2413

VL - 56

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JO - Korean Journal of Microbiology

JF - Korean Journal of Microbiology

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ER -

Complete genome sequence of Lab rys sp. KNU-23 isolated from ginseng soil in the Republic of Korea

Abstract

Keywords

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