Complete genome sequence of Lab rys sp. KNU-23 isolated from ginseng soil in the Republic of Korea

Min Ji Kim; Yeong Jun Park; Min Kyu Park; Chang Eon Park; Young Jae Jo; Setu Bazie Tagele; Jae Ho Shin

doi:10.7845/kjm.2020.0101

Complete genome sequence of Lab rys sp. KNU-23 isolated from ginseng soil in the Republic of Korea

Min Ji Kim
, Yeong Jun Park
, Min Kyu Park
, Chang Eon Park
, Young Jae Jo
, Setu Bazie Tagele
, Jae Ho Shin

School of Applied Bioscience

Kyungpook National University
Association of Ex-situ Conservation

Research output: Contribution to journal › Article › peer-review

4 Scopus citations

Abstract

Labrys sp. KNU-23 is a Gram-negative, aerobic, rod-shaped, tryptophan-producing, urea-decomposing bacterium that was isolated from ginseng soil in Bonghwa-gun, Republic of Korea. This study reports the complete genome sequence of strain KNU-23. The complete genome comprises two circular chromosomes of 5,388,854 bp and 2,162,438 bp with a GC content of 64 and 62.1%, respectively. The whole genome was predicted to have 6,868 protein coding genes. In addition, ureadecomposing and tryptophan-producing genes that are associated with plant growth-promoting activity were identified. Therefore, Labrys sp. KNU-23 is likely to be an agriculturally useful strain.

Original language	English
Pages (from-to)	410-412
Number of pages	3
Journal	Korean Journal of Microbiology
Volume	56
Issue number	4
DOIs	https://doi.org/10.7845/kjm.2020.0101
State	Published - 2020

Keywords

Labrys sp.
tryptophan
urease

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10.7845/kjm.2020.0101

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title = "Complete genome sequence of Lab rys sp. KNU-23 isolated from ginseng soil in the Republic of Korea",

abstract = "Labrys sp. KNU-23 is a Gram-negative, aerobic, rod-shaped, tryptophan-producing, urea-decomposing bacterium that was isolated from ginseng soil in Bonghwa-gun, Republic of Korea. This study reports the complete genome sequence of strain KNU-23. The complete genome comprises two circular chromosomes of 5,388,854 bp and 2,162,438 bp with a GC content of 64 and 62.1\%, respectively. The whole genome was predicted to have 6,868 protein coding genes. In addition, ureadecomposing and tryptophan-producing genes that are associated with plant growth-promoting activity were identified. Therefore, Labrys sp. KNU-23 is likely to be an agriculturally useful strain.",

keywords = "Labrys sp., tryptophan, urease",

author = "Kim, \{Min Ji\} and Park, \{Yeong Jun\} and Park, \{Min Kyu\} and Park, \{Chang Eon\} and Jo, \{Young Jae\} and Tagele, \{Setu Bazie\} and Shin, \{Jae Ho\}",

year = "2020",

doi = "10.7845/kjm.2020.0101",

language = "English",

volume = "56",

pages = "410--412",

journal = "Korean Journal of Microbiology",

issn = "0440-2413",

publisher = "The Korean Society for Mocrobiology / The Korean Society of Virology",

number = "4",

}

TY - JOUR

T1 - Complete genome sequence of Lab rys sp. KNU-23 isolated from ginseng soil in the Republic of Korea

AU - Kim, Min Ji

AU - Park, Yeong Jun

AU - Park, Min Kyu

AU - Park, Chang Eon

AU - Jo, Young Jae

AU - Tagele, Setu Bazie

AU - Shin, Jae Ho

PY - 2020

Y1 - 2020

N2 - Labrys sp. KNU-23 is a Gram-negative, aerobic, rod-shaped, tryptophan-producing, urea-decomposing bacterium that was isolated from ginseng soil in Bonghwa-gun, Republic of Korea. This study reports the complete genome sequence of strain KNU-23. The complete genome comprises two circular chromosomes of 5,388,854 bp and 2,162,438 bp with a GC content of 64 and 62.1%, respectively. The whole genome was predicted to have 6,868 protein coding genes. In addition, ureadecomposing and tryptophan-producing genes that are associated with plant growth-promoting activity were identified. Therefore, Labrys sp. KNU-23 is likely to be an agriculturally useful strain.

AB - Labrys sp. KNU-23 is a Gram-negative, aerobic, rod-shaped, tryptophan-producing, urea-decomposing bacterium that was isolated from ginseng soil in Bonghwa-gun, Republic of Korea. This study reports the complete genome sequence of strain KNU-23. The complete genome comprises two circular chromosomes of 5,388,854 bp and 2,162,438 bp with a GC content of 64 and 62.1%, respectively. The whole genome was predicted to have 6,868 protein coding genes. In addition, ureadecomposing and tryptophan-producing genes that are associated with plant growth-promoting activity were identified. Therefore, Labrys sp. KNU-23 is likely to be an agriculturally useful strain.

KW - Labrys sp.

KW - tryptophan

KW - urease

UR - https://www.scopus.com/pages/publications/85101503477

U2 - 10.7845/kjm.2020.0101

DO - 10.7845/kjm.2020.0101

M3 - Article

AN - SCOPUS:85101503477

SN - 0440-2413

VL - 56

SP - 410

EP - 412

JO - Korean Journal of Microbiology

JF - Korean Journal of Microbiology

IS - 4

ER -

Complete genome sequence of Lab rys sp. KNU-23 isolated from ginseng soil in the Republic of Korea

Abstract

Keywords

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