Complete genome sequence of multidrug-resistant Staphylococcus cohnii ssp. urealyticus strain SNUDS-2 isolated from farmed duck, Republic of Korea

Jee Eun Han; Seungki Lee; Dae Gwin Jeong; Sun Woo Yoon; Doo Jin Kim; Moo Seung Lee; Hye Kwon Kim; Sung Kyun Park; Ji Hyung Kim; Se Chang Park

doi:10.1016/j.jgar.2017.05.008

Complete genome sequence of multidrug-resistant Staphylococcus cohnii ssp. urealyticus strain SNUDS-2 isolated from farmed duck, Republic of Korea

Jee Eun Han, Seungki Lee, Dae Gwin Jeong, Sun Woo Yoon, Doo Jin Kim, Moo Seung Lee, Hye Kwon Kim, Sung Kyun Park, Ji Hyung Kim, Se Chang Park

Department of Veterinary Medicine

Research output: Contribution to journal › Comment/debate

2 Scopus citations

Abstract

Objectives Staphylococcus cohnii has become increasingly recognized as a potential pathogen of clinically significant nosocomial and farm animal infections. This study was designed to determine the genome of a multidrug-resistant S. cohnii subsp. urealyticus strain SNUDS-2 isolated from a farmed duck in Korea. Methods Genomic DNA was sequenced using the PacBio RS II system. The complete genome was annotated and the presence of antimicrobial resistance and virulence genes were identified. Results The annotated 2,625,703 bp genome contained various antimicrobial resistance genes conferring resistance to β-lactam, aminoglycosides, fluoroquinolones, phenicols and trimethoprim. The virulence-associated three synergistic hemolysins have been identified in the strain. Conclusions To the best of our knowledge, this is the first complete genome of S. cohnii, and will provide important insights into the biodiversity of CoNS and valuable information for the control of this emerging pathogen.

Original language	English
Pages (from-to)	37-39
Number of pages	3
Journal	Journal of Global Antimicrobial Resistance
Volume	10
DOIs	https://doi.org/10.1016/j.jgar.2017.05.008
State	Published - Sep 2017

Keywords

CoNS
Multidrug resistance
South Korea
Staphylococcus cohnii ssp. Urealyticus

Access to Document

10.1016/j.jgar.2017.05.008

Cite this

Han, J. E., Lee, S., Jeong, D. G., Yoon, S. W., Kim, D. J., Lee, M. S., Kim, H. K., Park, S. K., Kim, J. H., & Park, S. C. (2017). Complete genome sequence of multidrug-resistant Staphylococcus cohnii ssp. urealyticus strain SNUDS-2 isolated from farmed duck, Republic of Korea. Journal of Global Antimicrobial Resistance, 10, 37-39. https://doi.org/10.1016/j.jgar.2017.05.008

@article{eeea01a30388443f95ebb2d940401961,

title = "Complete genome sequence of multidrug-resistant Staphylococcus cohnii ssp. urealyticus strain SNUDS-2 isolated from farmed duck, Republic of Korea",

abstract = "Objectives Staphylococcus cohnii has become increasingly recognized as a potential pathogen of clinically significant nosocomial and farm animal infections. This study was designed to determine the genome of a multidrug-resistant S. cohnii subsp. urealyticus strain SNUDS-2 isolated from a farmed duck in Korea. Methods Genomic DNA was sequenced using the PacBio RS II system. The complete genome was annotated and the presence of antimicrobial resistance and virulence genes were identified. Results The annotated 2,625,703 bp genome contained various antimicrobial resistance genes conferring resistance to β-lactam, aminoglycosides, fluoroquinolones, phenicols and trimethoprim. The virulence-associated three synergistic hemolysins have been identified in the strain. Conclusions To the best of our knowledge, this is the first complete genome of S. cohnii, and will provide important insights into the biodiversity of CoNS and valuable information for the control of this emerging pathogen.",

keywords = "CoNS, Multidrug resistance, South Korea, Staphylococcus cohnii ssp. Urealyticus",

author = "Han, {Jee Eun} and Seungki Lee and Jeong, {Dae Gwin} and Yoon, {Sun Woo} and Kim, {Doo Jin} and Lee, {Moo Seung} and Kim, {Hye Kwon} and Park, {Sung Kyun} and Kim, {Ji Hyung} and Park, {Se Chang}",

note = "Publisher Copyright: {\textcopyright} 2017 International Society for Chemotherapy of Infection and Cancer",

year = "2017",

month = sep,

doi = "10.1016/j.jgar.2017.05.008",

language = "English",

volume = "10",

pages = "37--39",

journal = "Journal of Global Antimicrobial Resistance",

issn = "2213-7165",

publisher = "Elsevier B.V.",

}

TY - JOUR

T1 - Complete genome sequence of multidrug-resistant Staphylococcus cohnii ssp. urealyticus strain SNUDS-2 isolated from farmed duck, Republic of Korea

AU - Han, Jee Eun

AU - Lee, Seungki

AU - Jeong, Dae Gwin

AU - Yoon, Sun Woo

AU - Kim, Doo Jin

AU - Lee, Moo Seung

AU - Kim, Hye Kwon

AU - Park, Sung Kyun

AU - Kim, Ji Hyung

AU - Park, Se Chang

PY - 2017/9

Y1 - 2017/9

N2 - Objectives Staphylococcus cohnii has become increasingly recognized as a potential pathogen of clinically significant nosocomial and farm animal infections. This study was designed to determine the genome of a multidrug-resistant S. cohnii subsp. urealyticus strain SNUDS-2 isolated from a farmed duck in Korea. Methods Genomic DNA was sequenced using the PacBio RS II system. The complete genome was annotated and the presence of antimicrobial resistance and virulence genes were identified. Results The annotated 2,625,703 bp genome contained various antimicrobial resistance genes conferring resistance to β-lactam, aminoglycosides, fluoroquinolones, phenicols and trimethoprim. The virulence-associated three synergistic hemolysins have been identified in the strain. Conclusions To the best of our knowledge, this is the first complete genome of S. cohnii, and will provide important insights into the biodiversity of CoNS and valuable information for the control of this emerging pathogen.

AB - Objectives Staphylococcus cohnii has become increasingly recognized as a potential pathogen of clinically significant nosocomial and farm animal infections. This study was designed to determine the genome of a multidrug-resistant S. cohnii subsp. urealyticus strain SNUDS-2 isolated from a farmed duck in Korea. Methods Genomic DNA was sequenced using the PacBio RS II system. The complete genome was annotated and the presence of antimicrobial resistance and virulence genes were identified. Results The annotated 2,625,703 bp genome contained various antimicrobial resistance genes conferring resistance to β-lactam, aminoglycosides, fluoroquinolones, phenicols and trimethoprim. The virulence-associated three synergistic hemolysins have been identified in the strain. Conclusions To the best of our knowledge, this is the first complete genome of S. cohnii, and will provide important insights into the biodiversity of CoNS and valuable information for the control of this emerging pathogen.

KW - CoNS

KW - Multidrug resistance

KW - South Korea

KW - Staphylococcus cohnii ssp. Urealyticus

UR - http://www.scopus.com/inward/record.url?scp=85020842170&partnerID=8YFLogxK

U2 - 10.1016/j.jgar.2017.05.008

DO - 10.1016/j.jgar.2017.05.008

M3 - Comment/debate

C2 - 28578940

AN - SCOPUS:85020842170

SN - 2213-7165

VL - 10

SP - 37

EP - 39

JO - Journal of Global Antimicrobial Resistance

JF - Journal of Global Antimicrobial Resistance

ER -

Complete genome sequence of multidrug-resistant Staphylococcus cohnii ssp. urealyticus strain SNUDS-2 isolated from farmed duck, Republic of Korea

Abstract

Keywords

Access to Document

Other files and links

Fingerprint

Cite this