TY - JOUR
T1 - Epidemiological relationship of Clostridium perfringens isolated from feces and soil of horse farm using multi-locus sequence typing analysis
AU - Park, Chul Song
AU - Cho, Gil Jae
N1 - Publisher Copyright:
© 2023, Unique Scientific Publishers. All rights reserved.
PY - 2023/6/15
Y1 - 2023/6/15
N2 - We analyzed the epidemiological relationship of Clostridium (C.) perfringens isolated from feces and soil of horse farm using multi-locus sequence typing (MLST) and then compared it with standard strains registered in the National Center for Biotechnology Information. MLST results using MEGA 6.0 showed that total 13 clusters were formed in the phylogenetic tree of the housekeeping genes sequence of the standard strains, and the Korea Isolate Ju (KSJ) strains were classified into 8 types (cluster 4, cluster 5, cluster 6, cluster 7, cluster 8, cluster 11, cluster 12, and cluster 13). The KSJ strains were categorized into 4 groups. Each group had a high bootstrap value (>90%). These results for C. perfringens are considered to be helpful for performing epidemiological investigations and establishing prevention methods for diseases in the future.
AB - We analyzed the epidemiological relationship of Clostridium (C.) perfringens isolated from feces and soil of horse farm using multi-locus sequence typing (MLST) and then compared it with standard strains registered in the National Center for Biotechnology Information. MLST results using MEGA 6.0 showed that total 13 clusters were formed in the phylogenetic tree of the housekeeping genes sequence of the standard strains, and the Korea Isolate Ju (KSJ) strains were classified into 8 types (cluster 4, cluster 5, cluster 6, cluster 7, cluster 8, cluster 11, cluster 12, and cluster 13). The KSJ strains were categorized into 4 groups. Each group had a high bootstrap value (>90%). These results for C. perfringens are considered to be helpful for performing epidemiological investigations and establishing prevention methods for diseases in the future.
KW - Clostridium perfringens
KW - horse
KW - multi-locus sequence typing
KW - soil
UR - http://www.scopus.com/inward/record.url?scp=85163377983&partnerID=8YFLogxK
U2 - 10.47278/journal.ijvs/2023.006
DO - 10.47278/journal.ijvs/2023.006
M3 - Article
AN - SCOPUS:85163377983
SN - 2304-3075
VL - 12
SP - 623
EP - 628
JO - International Journal of Veterinary Science
JF - International Journal of Veterinary Science
IS - 4
ER -