Expressed sequence tags of Trichinella spiralis muscle stage larvae

Hae Kyung Park; Seong Won Chang; Se Won Kang; Min Kyoung Cho; Sun Hee Choi; Yeon Chul Hong; Yong Seok Lee; Hae Jin Jeong; Hak Sun Yu

doi:10.3347/kjp.2008.46.2.59

Expressed sequence tags of Trichinella spiralis muscle stage larvae

Hae Kyung Park, Seong Won Chang, Se Won Kang, Min Kyoung Cho, Sun Hee Choi, Yeon Chul Hong, Yong Seok Lee, Hae Jin Jeong, Hak Sun Yu

Department of Medicine

Research output: Contribution to journal › Article › peer-review

4 Scopus citations

Abstract

In order to obtain greater insight into the relevant genomic expression patterns of Trichinella spiralis, 992 expressed sequence tags (ESTs) were collected from a cDNA library of T. spiralis muscle stage larvae and assembled into 60 clusters and 385 singletons. Of them, 445 (44.7%) ESTs were annotated to their homologous genes, and small fractions were matched to known genes of nematodes. The annotated ESTs were classified into 25 eukaryotic orthologous groups (KOG). Cytochrome C oxidase (34 clones) was found to be most frequent species.

Original language	English
Pages (from-to)	59-63
Number of pages	5
Journal	Korean Journal of Parasitology
Volume	46
Issue number	2
DOIs	https://doi.org/10.3347/kjp.2008.46.2.59
State	Published - 2008

Keywords

Eukaryotic orthologous groups (KOG)
Expressed sequence tags
Muscle stage larva
Trichinella spiralis

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

Access to Document

10.3347/kjp.2008.46.2.59

Cite this

@article{91d03d3c4f4142b29e579f62fda9fdea,

title = "Expressed sequence tags of Trichinella spiralis muscle stage larvae",

abstract = "In order to obtain greater insight into the relevant genomic expression patterns of Trichinella spiralis, 992 expressed sequence tags (ESTs) were collected from a cDNA library of T. spiralis muscle stage larvae and assembled into 60 clusters and 385 singletons. Of them, 445 (44.7%) ESTs were annotated to their homologous genes, and small fractions were matched to known genes of nematodes. The annotated ESTs were classified into 25 eukaryotic orthologous groups (KOG). Cytochrome C oxidase (34 clones) was found to be most frequent species.",

keywords = "Eukaryotic orthologous groups (KOG), Expressed sequence tags, Muscle stage larva, Trichinella spiralis",

author = "Park, {Hae Kyung} and Chang, {Seong Won} and Kang, {Se Won} and Cho, {Min Kyoung} and Choi, {Sun Hee} and Hong, {Yeon Chul} and Lee, {Yong Seok} and Jeong, {Hae Jin} and Yu, {Hak Sun}",

year = "2008",

doi = "10.3347/kjp.2008.46.2.59",

language = "English",

volume = "46",

pages = "59--63",

journal = "Korean Journal of Parasitology",

issn = "0023-4001",

publisher = "Korean Society for Parasitology and Tropical Medicine",

number = "2",

}

TY - JOUR

T1 - Expressed sequence tags of Trichinella spiralis muscle stage larvae

AU - Park, Hae Kyung

AU - Chang, Seong Won

AU - Kang, Se Won

AU - Cho, Min Kyoung

AU - Choi, Sun Hee

AU - Hong, Yeon Chul

AU - Lee, Yong Seok

AU - Jeong, Hae Jin

AU - Yu, Hak Sun

PY - 2008

Y1 - 2008

N2 - In order to obtain greater insight into the relevant genomic expression patterns of Trichinella spiralis, 992 expressed sequence tags (ESTs) were collected from a cDNA library of T. spiralis muscle stage larvae and assembled into 60 clusters and 385 singletons. Of them, 445 (44.7%) ESTs were annotated to their homologous genes, and small fractions were matched to known genes of nematodes. The annotated ESTs were classified into 25 eukaryotic orthologous groups (KOG). Cytochrome C oxidase (34 clones) was found to be most frequent species.

AB - In order to obtain greater insight into the relevant genomic expression patterns of Trichinella spiralis, 992 expressed sequence tags (ESTs) were collected from a cDNA library of T. spiralis muscle stage larvae and assembled into 60 clusters and 385 singletons. Of them, 445 (44.7%) ESTs were annotated to their homologous genes, and small fractions were matched to known genes of nematodes. The annotated ESTs were classified into 25 eukaryotic orthologous groups (KOG). Cytochrome C oxidase (34 clones) was found to be most frequent species.

KW - Eukaryotic orthologous groups (KOG)

KW - Expressed sequence tags

KW - Muscle stage larva

KW - Trichinella spiralis

UR - http://www.scopus.com/inward/record.url?scp=48449106898&partnerID=8YFLogxK

U2 - 10.3347/kjp.2008.46.2.59

DO - 10.3347/kjp.2008.46.2.59

M3 - Article

C2 - 18552539

AN - SCOPUS:48449106898

SN - 0023-4001

VL - 46

SP - 59

EP - 63

JO - Korean Journal of Parasitology

JF - Korean Journal of Parasitology

IS - 2

ER -

Expressed sequence tags of Trichinella spiralis muscle stage larvae

Abstract

Keywords

UN SDGs

Access to Document

Other files and links

Fingerprint

Cite this