Expressed sequence tags of Trichinella spiralis muscle stage larvae

Hae Kyung Park; Seong Won Chang; Se Won Kang; Min Kyoung Cho; Sun Hee Choi; Yeon Chul Hong; Yong Seok Lee; Hae Jin Jeong; Hak Sun Yu

doi:10.3347/kjp.2008.46.2.59

Expressed sequence tags of Trichinella spiralis muscle stage larvae

Hae Kyung Park
, Seong Won Chang
, Se Won Kang
, Min Kyoung Cho
, Sun Hee Choi
, Yeon Chul Hong
, Yong Seok Lee
, Hae Jin Jeong
, Hak Sun Yu

Department of Medicine

Pusan National University
Inje University

Research output: Contribution to journal › Article › peer-review

4 Scopus citations

Abstract

In order to obtain greater insight into the relevant genomic expression patterns of Trichinella spiralis, 992 expressed sequence tags (ESTs) were collected from a cDNA library of T. spiralis muscle stage larvae and assembled into 60 clusters and 385 singletons. Of them, 445 (44.7%) ESTs were annotated to their homologous genes, and small fractions were matched to known genes of nematodes. The annotated ESTs were classified into 25 eukaryotic orthologous groups (KOG). Cytochrome C oxidase (34 clones) was found to be most frequent species.

Original language	English
Pages (from-to)	59-63
Number of pages	5
Journal	Korean Journal of Parasitology
Volume	46
Issue number	2
DOIs	https://doi.org/10.3347/kjp.2008.46.2.59
State	Published - 2008

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

SDG 3 Good Health and Well-being

Keywords

Eukaryotic orthologous groups (KOG)
Expressed sequence tags
Muscle stage larva
Trichinella spiralis

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10.3347/kjp.2008.46.2.59

Cite this

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title = "Expressed sequence tags of Trichinella spiralis muscle stage larvae",

abstract = "In order to obtain greater insight into the relevant genomic expression patterns of Trichinella spiralis, 992 expressed sequence tags (ESTs) were collected from a cDNA library of T. spiralis muscle stage larvae and assembled into 60 clusters and 385 singletons. Of them, 445 (44.7\%) ESTs were annotated to their homologous genes, and small fractions were matched to known genes of nematodes. The annotated ESTs were classified into 25 eukaryotic orthologous groups (KOG). Cytochrome C oxidase (34 clones) was found to be most frequent species.",

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author = "Park, \{Hae Kyung\} and Chang, \{Seong Won\} and Kang, \{Se Won\} and Cho, \{Min Kyoung\} and Choi, \{Sun Hee\} and Hong, \{Yeon Chul\} and Lee, \{Yong Seok\} and Jeong, \{Hae Jin\} and Yu, \{Hak Sun\}",

year = "2008",

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language = "English",

volume = "46",

pages = "59--63",

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T1 - Expressed sequence tags of Trichinella spiralis muscle stage larvae

AU - Park, Hae Kyung

AU - Chang, Seong Won

AU - Kang, Se Won

AU - Cho, Min Kyoung

AU - Choi, Sun Hee

AU - Hong, Yeon Chul

AU - Lee, Yong Seok

AU - Jeong, Hae Jin

AU - Yu, Hak Sun

PY - 2008

Y1 - 2008

N2 - In order to obtain greater insight into the relevant genomic expression patterns of Trichinella spiralis, 992 expressed sequence tags (ESTs) were collected from a cDNA library of T. spiralis muscle stage larvae and assembled into 60 clusters and 385 singletons. Of them, 445 (44.7%) ESTs were annotated to their homologous genes, and small fractions were matched to known genes of nematodes. The annotated ESTs were classified into 25 eukaryotic orthologous groups (KOG). Cytochrome C oxidase (34 clones) was found to be most frequent species.

AB - In order to obtain greater insight into the relevant genomic expression patterns of Trichinella spiralis, 992 expressed sequence tags (ESTs) were collected from a cDNA library of T. spiralis muscle stage larvae and assembled into 60 clusters and 385 singletons. Of them, 445 (44.7%) ESTs were annotated to their homologous genes, and small fractions were matched to known genes of nematodes. The annotated ESTs were classified into 25 eukaryotic orthologous groups (KOG). Cytochrome C oxidase (34 clones) was found to be most frequent species.

KW - Eukaryotic orthologous groups (KOG)

KW - Expressed sequence tags

KW - Muscle stage larva

KW - Trichinella spiralis

UR - https://www.scopus.com/pages/publications/48449106898

U2 - 10.3347/kjp.2008.46.2.59

DO - 10.3347/kjp.2008.46.2.59

M3 - Article

C2 - 18552539

AN - SCOPUS:48449106898

SN - 0023-4001

VL - 46

SP - 59

EP - 63

JO - Korean Journal of Parasitology

JF - Korean Journal of Parasitology

IS - 2

ER -

Expressed sequence tags of Trichinella spiralis muscle stage larvae

Abstract

UN SDGs

Keywords

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