Genome sequencing to develop Paenibacillus donghaensis strain JH8T (KCTC 13049T = LMG 23780T) as a microbial fertilizer and correlation to its plant growth-promoting phenotype

Byung Kwon Jung; Sung Jun Hong; Hyung Woo Jo; Yeon Gyun Jung; Yeong Jun Park; Chang Eon Park; Min Chul Kim; Jerald Conrad Ibal; Dong Hyun Roh; Jae Ho Shin

doi:10.1016/j.margen.2017.11.006

Genome sequencing to develop Paenibacillus donghaensis strain JH8^T (KCTC 13049^T = LMG 23780^T) as a microbial fertilizer and correlation to its plant growth-promoting phenotype

Byung Kwon Jung
, Sung Jun Hong
, Hyung Woo Jo
, Yeon Gyun Jung
, Yeong Jun Park
, Chang Eon Park
, Min Chul Kim
, Jerald Conrad Ibal
, Dong Hyun Roh
, Jae Ho Shin

School of Applied Bioscience

Research output: Contribution to journal › Article › peer-review

2 Scopus citations

Abstract

Paenibacillus donghaensis JH8^T (KCTC 13049^T = LMG 23780^T) is a Gram-positive, mesophilic, endospore-forming bacterium isolated from East Sea sediment at depth of 500 m in Korea. The strain exhibited plant cell wall hydrolytic and plant growth promoting abilities. The complete genome of P. donghaensis strain JH8^T contains 7602 protein-coding sequences and an average GC content of 49.7% in its chromosome (8.54 Mbp). Genes encoding proteins related to the degradation of plant cell wall, nitrogen-fixation, phosphate solubilization, and synthesis of siderophore were existed in the P. donghaensis strain JH8^T genome, indicating that this strain can be used as an eco-friendly microbial agent for increasing agricultural productivity.

Original language	English
Pages (from-to)	39-42
Number of pages	4
Journal	Marine Genomics
Volume	37
DOIs	https://doi.org/10.1016/j.margen.2017.11.006
State	Published - Feb 2018

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

SDG 2 Zero Hunger
SDG 13 Climate Action

Keywords

Biofertilizer
Nitrogen-fixing bacteria
Paenibacillus donghaensis
Plant cell wall hydrolytic enzyme

Access to Document

10.1016/j.margen.2017.11.006

Cite this

Jung, B. K., Hong, S. J., Jo, H. W., Jung, Y. G., Park, Y. J., Park, C. E., Kim, M. C., Ibal, J. C., Roh, D. H., & Shin, J. H. (2018). Genome sequencing to develop Paenibacillus donghaensis strain JH8^T (KCTC 13049^T = LMG 23780^T) as a microbial fertilizer and correlation to its plant growth-promoting phenotype. Marine Genomics, 37, 39-42. https://doi.org/10.1016/j.margen.2017.11.006

@article{b8ff1b60e8134fff9ec2f6bd81ab97a9,

title = "Genome sequencing to develop Paenibacillus donghaensis strain JH8T (KCTC 13049T = LMG 23780T) as a microbial fertilizer and correlation to its plant growth-promoting phenotype",

abstract = "Paenibacillus donghaensis JH8T (KCTC 13049T = LMG 23780T) is a Gram-positive, mesophilic, endospore-forming bacterium isolated from East Sea sediment at depth of 500 m in Korea. The strain exhibited plant cell wall hydrolytic and plant growth promoting abilities. The complete genome of P. donghaensis strain JH8T contains 7602 protein-coding sequences and an average GC content of 49.7\% in its chromosome (8.54 Mbp). Genes encoding proteins related to the degradation of plant cell wall, nitrogen-fixation, phosphate solubilization, and synthesis of siderophore were existed in the P. donghaensis strain JH8T genome, indicating that this strain can be used as an eco-friendly microbial agent for increasing agricultural productivity.",

keywords = "Biofertilizer, Nitrogen-fixing bacteria, Paenibacillus donghaensis, Plant cell wall hydrolytic enzyme",

author = "Jung, \{Byung Kwon\} and Hong, \{Sung Jun\} and Jo, \{Hyung Woo\} and Jung, \{Yeon Gyun\} and Park, \{Yeong Jun\} and Park, \{Chang Eon\} and Kim, \{Min Chul\} and Ibal, \{Jerald Conrad\} and Roh, \{Dong Hyun\} and Shin, \{Jae Ho\}",

note = "Publisher Copyright: {\textcopyright} 2017 Elsevier B.V.",

year = "2018",

month = feb,

doi = "10.1016/j.margen.2017.11.006",

language = "English",

volume = "37",

pages = "39--42",

journal = "Marine Genomics",

issn = "1874-7787",

publisher = "Elsevier B.V.",

}

TY - JOUR

T1 - Genome sequencing to develop Paenibacillus donghaensis strain JH8T (KCTC 13049T = LMG 23780T) as a microbial fertilizer and correlation to its plant growth-promoting phenotype

AU - Jung, Byung Kwon

AU - Hong, Sung Jun

AU - Jo, Hyung Woo

AU - Jung, Yeon Gyun

AU - Park, Yeong Jun

AU - Park, Chang Eon

AU - Kim, Min Chul

AU - Ibal, Jerald Conrad

AU - Roh, Dong Hyun

AU - Shin, Jae Ho

PY - 2018/2

Y1 - 2018/2

N2 - Paenibacillus donghaensis JH8T (KCTC 13049T = LMG 23780T) is a Gram-positive, mesophilic, endospore-forming bacterium isolated from East Sea sediment at depth of 500 m in Korea. The strain exhibited plant cell wall hydrolytic and plant growth promoting abilities. The complete genome of P. donghaensis strain JH8T contains 7602 protein-coding sequences and an average GC content of 49.7% in its chromosome (8.54 Mbp). Genes encoding proteins related to the degradation of plant cell wall, nitrogen-fixation, phosphate solubilization, and synthesis of siderophore were existed in the P. donghaensis strain JH8T genome, indicating that this strain can be used as an eco-friendly microbial agent for increasing agricultural productivity.

AB - Paenibacillus donghaensis JH8T (KCTC 13049T = LMG 23780T) is a Gram-positive, mesophilic, endospore-forming bacterium isolated from East Sea sediment at depth of 500 m in Korea. The strain exhibited plant cell wall hydrolytic and plant growth promoting abilities. The complete genome of P. donghaensis strain JH8T contains 7602 protein-coding sequences and an average GC content of 49.7% in its chromosome (8.54 Mbp). Genes encoding proteins related to the degradation of plant cell wall, nitrogen-fixation, phosphate solubilization, and synthesis of siderophore were existed in the P. donghaensis strain JH8T genome, indicating that this strain can be used as an eco-friendly microbial agent for increasing agricultural productivity.

KW - Biofertilizer

KW - Nitrogen-fixing bacteria

KW - Paenibacillus donghaensis

KW - Plant cell wall hydrolytic enzyme

UR - https://www.scopus.com/pages/publications/85035131899

U2 - 10.1016/j.margen.2017.11.006

DO - 10.1016/j.margen.2017.11.006

M3 - Article

C2 - 33250125

AN - SCOPUS:85035131899

SN - 1874-7787

VL - 37

SP - 39

EP - 42

JO - Marine Genomics

JF - Marine Genomics

ER -