Hippocampal shape modeling based on a progressive template surface deformation and its verification

The Lothian Birth Cohort 1936 Collaborative Group, The Alzheimer's Disease Neuroimaging Initiative

Research output: Contribution to journalArticlepeer-review

25 Scopus citations

Abstract

Accurately recovering the hippocampal shapes against rough and noisy segmentations is as challenging as achieving good anatomical correspondence between the individual shapes. To address these issues, we propose a mesh-to-volume registration approach, characterized by a progressive model deformation. Our model implements flexible weighting scheme for model rigidity under a multi-level neighborhood for vertex connectivity. This method induces a large-to-small scale deformation of a template surface to build the pairwise correspondence by minimizing geometric distortion while robustly restoring the individuals' shape characteristics. We evaluated the proposed method's 1) accuracy and robustness in smooth surface reconstruction, 2) sensitivity in detecting significant shape differences between healthy control and disease groups (mild cognitive impairment and Alzheimer's disease), 3) robustness in constructing the anatomical correspondence between individual shape models, and 4) applicability in identifying subtle shape changes in relation to cognitive abilities in a healthy population. We compared the performance of the proposed method with other well-known methods - SPHARM-PDM, ShapeWorks and LDDMM volume registration with template injection - using various metrics of shape similarity, surface roughness, volume, and shape deformity. The experimental results showed that the proposed method generated smooth surfaces with less volume differences and better shape similarity to input volumes than others. The statistical analyses with clinical variables also showed that it was sensitive in detecting subtle shape changes of hippocampus.

Original languageEnglish
Article number6990617
Pages (from-to)1242-1261
Number of pages20
JournalIEEE Transactions on Medical Imaging
Volume34
Issue number6
DOIs
StatePublished - 1 Jun 2015

Keywords

  • Brain
  • hippocampus
  • magnetic resonance imaging (MRI)
  • progressive model deformation
  • shape analysis

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