HVEM DataGrid: Implementation of a biologic data management system for experiments with high voltage electron microscope

Im Young Jung, In Soon Cho, Heon Y. Yeom, Hee S. Kweon, Jysoo Lee

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

7 Scopus citations

Abstract

This paper proposes High Voltage Electron Microscope (HVEM) DataGrid for biological data management. HVEM DataGrid allows researchers to share the results of their biological experiments using HVEM, so that they can analyze them together to perform good research. The proposed system is for people whose primary work is to access HVEM, to obtain experimental results for biological samples and to store or retrieve them on HVEM DataGrid. The architecture of the HVEM Grid[3] is designed to materialize all the necessary conditions in allowing the user 1) to control every part of HVEM in a fine-grained manner, 2) to check the HVEM and observe various states of the specimen, 3) to manipulate their high resolution 2-D and 3-D images, and 4) to handle the experimental data including storing and searching them. HVEM DataGrid, a subsystem of the HVEM Grid system, is to provide a simple web-based controlling method for remote biological data.

Original languageEnglish
Title of host publicationDistributed, High-Performance and Grid Computing in Computational Biology International Workshop, GCCB 2006, Proceedings
PublisherSpringer Verlag
Pages175-190
Number of pages16
ISBN (Print)3540698418, 9783540698418
DOIs
StatePublished - 2007
EventDistributed, High-Performance and Grid Computing in Computational Biology International Workshop, GCCB 2006 - Eilat, Israel
Duration: 21 Jan 200721 Jan 2007

Publication series

NameLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume4360 LNBI
ISSN (Print)0302-9743
ISSN (Electronic)1611-3349

Conference

ConferenceDistributed, High-Performance and Grid Computing in Computational Biology International Workshop, GCCB 2006
Country/TerritoryIsrael
CityEilat
Period21/01/0721/01/07

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