Hymenobacter aquaticus sp. nov., a radiation-resistant bacterium isolated from a river

Jae Jin Lee, Su Jin Park, Yeon Hee Lee, Seung Yeol Lee, Leonid N. Ten, Hee Young Jung

Research output: Contribution to journalArticlepeer-review

24 Scopus citations

Abstract

A Gram-stain-negative, non-motile, non-spore-forming, rod-shaped, aerobic bacterial strain, designated 16F3PT, was isolated from the Han River, South Korea, and characterized taxonomically using a polyphasic approach. Phylogenetic analysis based on 16S rRNA gene sequences revealed 16F3PT to be within the genus Hymenobacter, and most closely related to Hymenobacter chitinivorans Txc1T (98.62%) and Hymenobacter elongatus VUG-A112T (98.46%). The phylogenetic distance from other species of the genus Hymenobacter with validly published names was greater than 4% (i.e. sequence similarity was less than 96.0%). Chemotaxonomic data also supported the classification of strain 16F3PT within the genus Hymenobacter. C16: 0 (19.8%), summed feature 3 (C16: 1ω7c/C16: 1ω6c; 15.4%) and iso-C15: 0 (13.0%) were the major fatty acids, MK-7 was the predominant respiratory quinone, and phosphatidylethanolamine was the major polar lipid. The G+C content of the genomic DNA of strain 16F3PT was 61.9 mol%. DNA–DNA hybridization experiments showed that the values for DNA–DNA relatedness between strain 16F3PT and the phylogenetically closest neighbours were below 19%. On the basis of its phenotypic properties and phylogenetic distinctiveness, strain 16F3PT represents a novel species of the genus Hymenobacter, for which the name Hymenobacter aquaticus sp. nov. is proposed. The type strain is 16F3PT (=KCTC 52194T=JCM 31653T).

Original languageEnglish
Article number001788
Pages (from-to)1206-1211
Number of pages6
JournalInternational Journal of Systematic and Evolutionary Microbiology
Volume67
Issue number5
DOIs
StatePublished - May 2017

Keywords

  • Bacteroidetes
  • Hymenobacter
  • Polyphasic taxonomy

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