TY - JOUR
T1 - Hymenobacter radiodurans sp. nov., isolated from soil in the Republic of Korea
AU - Jang, Jun Hwee
AU - Maeng, Soo Hyun
AU - Jung, Hee Young
AU - Kim, Myung Kyum
AU - Subramani, Gayathri
N1 - Publisher Copyright:
© 2020, Springer-Verlag GmbH Germany, part of Springer Nature.
PY - 2021/3
Y1 - 2021/3
N2 - A bacterial strain, designated 17J36-26T, was isolated from the UV-irradiated soil from Jeju Island, South Korea. Cells are Gram negative, strictly aerobic, non-motile, non-spore forming, rod shaped, and catalase and oxidase positive. The major fatty acids of strain 17J36-26T were summed feature 4 (17:1 iso I/17:1 anteiso B), summed feature 3 (16:1 ω6c/16:1 ω7c), C16:1ω5c and iso-C15:0. The polar lipid profile contained phosphatidylethanolamine, unidentified aminophospholipid, phospholipids and four unidentified lipids. The G+C content of the strain 17J36-26T was 62.6 mol%. The 16S rRNA gene sequence analysis showed that strain 17J36-26T was phylogenetically related to Hymenobacter qilianensis DK6-37T and Hymenobacter roseosalivarius AA718T (97.5% and 96.8% sequence similarity, respectively). Strain 17J36-26T showed resistance to UV radiation. Both average nucleotide identity (ANI) and in silico DNA–DNA hybridization (isDDH) values between strains 17J36-26T and type strains of Hymenobacter species were lower than the cut-off (≥ 95–96% for ANI and ≥ 70% for isDDH) to define a bacterial new species. The polyphasic approach using genotypic, phenotypic and chemotaxonomic data showed that strain 17J36-26T could be distinguished from its phylogenetically related species, and thus, the strain representative of a novel species within the genus Hymenobacter, for which the name Hymenobacter radiodurans sp. nov. (type strain 17J36-26T = KCTC 62269T = JCM 33185T) is proposed.
AB - A bacterial strain, designated 17J36-26T, was isolated from the UV-irradiated soil from Jeju Island, South Korea. Cells are Gram negative, strictly aerobic, non-motile, non-spore forming, rod shaped, and catalase and oxidase positive. The major fatty acids of strain 17J36-26T were summed feature 4 (17:1 iso I/17:1 anteiso B), summed feature 3 (16:1 ω6c/16:1 ω7c), C16:1ω5c and iso-C15:0. The polar lipid profile contained phosphatidylethanolamine, unidentified aminophospholipid, phospholipids and four unidentified lipids. The G+C content of the strain 17J36-26T was 62.6 mol%. The 16S rRNA gene sequence analysis showed that strain 17J36-26T was phylogenetically related to Hymenobacter qilianensis DK6-37T and Hymenobacter roseosalivarius AA718T (97.5% and 96.8% sequence similarity, respectively). Strain 17J36-26T showed resistance to UV radiation. Both average nucleotide identity (ANI) and in silico DNA–DNA hybridization (isDDH) values between strains 17J36-26T and type strains of Hymenobacter species were lower than the cut-off (≥ 95–96% for ANI and ≥ 70% for isDDH) to define a bacterial new species. The polyphasic approach using genotypic, phenotypic and chemotaxonomic data showed that strain 17J36-26T could be distinguished from its phylogenetically related species, and thus, the strain representative of a novel species within the genus Hymenobacter, for which the name Hymenobacter radiodurans sp. nov. (type strain 17J36-26T = KCTC 62269T = JCM 33185T) is proposed.
KW - Hymenobacer
KW - Hymenobaceraceae
KW - Novel species
KW - UV irradiation
UR - http://www.scopus.com/inward/record.url?scp=85092153676&partnerID=8YFLogxK
U2 - 10.1007/s00203-020-01895-y
DO - 10.1007/s00203-020-01895-y
M3 - Article
C2 - 33026471
AN - SCOPUS:85092153676
SN - 0302-8933
VL - 203
SP - 655
EP - 661
JO - Archives of Microbiology
JF - Archives of Microbiology
IS - 2
ER -