TY - JOUR
T1 - Larkinella knui sp. nov., isolated from soil
AU - Jeon, Jongguen
AU - Ten, Leonid N.
AU - Lee, Jae Jin
AU - Lee, Seung Yeol
AU - Park, Sangkyu
AU - Cho, Young Je
AU - Kim, Myung Kyum
AU - Jung, Hee Young
N1 - Publisher Copyright:
© 2018 IUMS.
PY - 2018/2
Y1 - 2018/2
N2 - A Gram-stain-negative, motile by gliding, rod-shaped, aerobic bacterium, designated 15J6-3T6T, was isolated from a soil sample collected from Jeju Island, South Korea, and characterized taxonomically using a polyphasic approach. Comparative 16S rRNA gene sequence analysis showed that strain 15J6-3T6T belongs to the family Cytophagaceae and is related to Larkinella harenae 15J9-9T (93.9% similarity), Larkinella arboricola Z0532T (93.6%), Larkinella bovis M2TB15T (93.3%), and Larkinella insperata LMG 22510T (93.3%). The DNA G+C content of strain 15J6-3T6T was 50.6 mol%. The detection of phosphatidylethanolamine and an unidentified polar lipid as major polar lipids, menaquinone-7 as the predominant quinone, and C16:1ω5c, iso-C15:0, and iso-C17:0 3-OH as the major fatty acids also supports the affiliation of the isolate to the genus Larkinella. Based on its phenotypic properties and phylogenetic distinctiveness, we propose that strain 15J6-3T6T should be classified in the genus Larkinella as a representative of a novel species, for which the name Larkinella knui sp. nov. is proposed. The type strain is 15J6-3T6T (=KCTC 42998T=JCM 31989T).
AB - A Gram-stain-negative, motile by gliding, rod-shaped, aerobic bacterium, designated 15J6-3T6T, was isolated from a soil sample collected from Jeju Island, South Korea, and characterized taxonomically using a polyphasic approach. Comparative 16S rRNA gene sequence analysis showed that strain 15J6-3T6T belongs to the family Cytophagaceae and is related to Larkinella harenae 15J9-9T (93.9% similarity), Larkinella arboricola Z0532T (93.6%), Larkinella bovis M2TB15T (93.3%), and Larkinella insperata LMG 22510T (93.3%). The DNA G+C content of strain 15J6-3T6T was 50.6 mol%. The detection of phosphatidylethanolamine and an unidentified polar lipid as major polar lipids, menaquinone-7 as the predominant quinone, and C16:1ω5c, iso-C15:0, and iso-C17:0 3-OH as the major fatty acids also supports the affiliation of the isolate to the genus Larkinella. Based on its phenotypic properties and phylogenetic distinctiveness, we propose that strain 15J6-3T6T should be classified in the genus Larkinella as a representative of a novel species, for which the name Larkinella knui sp. nov. is proposed. The type strain is 15J6-3T6T (=KCTC 42998T=JCM 31989T).
KW - Bacteroidetes
KW - Larkinella
KW - Soil bacteria
UR - http://www.scopus.com/inward/record.url?scp=85041855332&partnerID=8YFLogxK
U2 - 10.1099/ijsem.0.002550
DO - 10.1099/ijsem.0.002550
M3 - Article
C2 - 29300161
AN - SCOPUS:85041855332
SN - 1466-5026
VL - 68
SP - 582
EP - 588
JO - International Journal of Systematic and Evolutionary Microbiology
JF - International Journal of Systematic and Evolutionary Microbiology
IS - 2
M1 - 002550
ER -