Larkinella terrae sp. nov., isolated from soil on Jeju Island, South Korea

Leonid N. Ten; Jongguen Jeon; Su Jin Park; Sangkyu Park; Seung Yeol Lee; Myung Kyum Kim; Hee Young Jung

doi:10.1007/s10482-017-0955-y

Larkinella terrae sp. nov., isolated from soil on Jeju Island, South Korea

Leonid N. Ten
, Jongguen Jeon
, Su Jin Park
, Sangkyu Park
, Seung Yeol Lee
, Myung Kyum Kim
, Hee Young Jung

Department of Plant Medicine

Research output: Contribution to journal › Article › peer-review

5 Scopus citations

Abstract

A Gram-stain negative, non-motile, rod-shaped, aerobic bacterium, designated 15J8-8 ^T , was isolated from a soil sample collected on Jeju Island, South Korea, and characterized taxonomically using a polyphasic approach. Comparative 16S rRNA gene sequence analysis showed that strain 15J8-8 ^T belongs to the family Cytophagaceae and is related to Larkinella bovis M2TB15 ^T (95.0%), ‘Larkinella harenae’ 15J9-9 (94.5%), Larkinella arboricola Z0532 ^T (93.2%), and Larkinella insperata LMG 22510 ^T (93.0%). The DNA G+C content of strain 15J8-8 ^T was 50.5 mol%. The detection of phosphatidylethanolamine and two unidentified polar lipids as major polar lipids; menaquinone-7 as the predominant quinone; and C _16:1 ω5c, C _16:0 N alcohol, and iso-C _15:0 as the major fatty acids also supported the affiliation of the isolate to the genus Larkinella. Based on its phenotypic properties and phylogenetic distinctiveness, strain 15J8-8 ^T should be classified in the genus Larkinella as representative of a novel species, for which the name Larkinella terrae sp. nov. is proposed. The type strain is 15J8-8 ^T (= KCTC 52001 ^T = JCM 31990 ^T ).

Original language	English
Pages (from-to)	333-341
Number of pages	9
Journal	Antonie van Leeuwenhoek
Volume	111
Issue number	3
DOIs	https://doi.org/10.1007/s10482-017-0955-y
State	Published - 1 Mar 2018

Keywords

Bacteroidetes
Larkinella
Soil bacteria

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10.1007/s10482-017-0955-y

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title = "Larkinella terrae sp. nov., isolated from soil on Jeju Island, South Korea",

abstract = " A Gram-stain negative, non-motile, rod-shaped, aerobic bacterium, designated 15J8-8 T , was isolated from a soil sample collected on Jeju Island, South Korea, and characterized taxonomically using a polyphasic approach. Comparative 16S rRNA gene sequence analysis showed that strain 15J8-8 T belongs to the family Cytophagaceae and is related to Larkinella bovis M2TB15 T (95.0\%), {\textquoteleft}Larkinella harenae{\textquoteright} 15J9-9 (94.5\%), Larkinella arboricola Z0532 T (93.2\%), and Larkinella insperata LMG 22510 T (93.0\%). The DNA G+C content of strain 15J8-8 T was 50.5 mol\%. The detection of phosphatidylethanolamine and two unidentified polar lipids as major polar lipids; menaquinone-7 as the predominant quinone; and C 16:1 ω5c, C 16:0 N alcohol, and iso-C 15:0 as the major fatty acids also supported the affiliation of the isolate to the genus Larkinella. Based on its phenotypic properties and phylogenetic distinctiveness, strain 15J8-8 T should be classified in the genus Larkinella as representative of a novel species, for which the name Larkinella terrae sp. nov. is proposed. The type strain is 15J8-8 T (= KCTC 52001 T = JCM 31990 T ).",

keywords = "Bacteroidetes, Larkinella, Soil bacteria",

author = "Ten, \{Leonid N.\} and Jongguen Jeon and Park, \{Su Jin\} and Sangkyu Park and Lee, \{Seung Yeol\} and Kim, \{Myung Kyum\} and Jung, \{Hee Young\}",

note = "Publisher Copyright: {\textcopyright} 2017, Springer International Publishing AG.",

year = "2018",

month = mar,

day = "1",

doi = "10.1007/s10482-017-0955-y",

language = "English",

volume = "111",

pages = "333--341",

journal = "Antonie van Leeuwenhoek",

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TY - JOUR

T1 - Larkinella terrae sp. nov., isolated from soil on Jeju Island, South Korea

AU - Ten, Leonid N.

AU - Jeon, Jongguen

AU - Park, Su Jin

AU - Park, Sangkyu

AU - Lee, Seung Yeol

AU - Kim, Myung Kyum

AU - Jung, Hee Young

PY - 2018/3/1

Y1 - 2018/3/1

N2 - A Gram-stain negative, non-motile, rod-shaped, aerobic bacterium, designated 15J8-8 T , was isolated from a soil sample collected on Jeju Island, South Korea, and characterized taxonomically using a polyphasic approach. Comparative 16S rRNA gene sequence analysis showed that strain 15J8-8 T belongs to the family Cytophagaceae and is related to Larkinella bovis M2TB15 T (95.0%), ‘Larkinella harenae’ 15J9-9 (94.5%), Larkinella arboricola Z0532 T (93.2%), and Larkinella insperata LMG 22510 T (93.0%). The DNA G+C content of strain 15J8-8 T was 50.5 mol%. The detection of phosphatidylethanolamine and two unidentified polar lipids as major polar lipids; menaquinone-7 as the predominant quinone; and C 16:1 ω5c, C 16:0 N alcohol, and iso-C 15:0 as the major fatty acids also supported the affiliation of the isolate to the genus Larkinella. Based on its phenotypic properties and phylogenetic distinctiveness, strain 15J8-8 T should be classified in the genus Larkinella as representative of a novel species, for which the name Larkinella terrae sp. nov. is proposed. The type strain is 15J8-8 T (= KCTC 52001 T = JCM 31990 T ).

AB - A Gram-stain negative, non-motile, rod-shaped, aerobic bacterium, designated 15J8-8 T , was isolated from a soil sample collected on Jeju Island, South Korea, and characterized taxonomically using a polyphasic approach. Comparative 16S rRNA gene sequence analysis showed that strain 15J8-8 T belongs to the family Cytophagaceae and is related to Larkinella bovis M2TB15 T (95.0%), ‘Larkinella harenae’ 15J9-9 (94.5%), Larkinella arboricola Z0532 T (93.2%), and Larkinella insperata LMG 22510 T (93.0%). The DNA G+C content of strain 15J8-8 T was 50.5 mol%. The detection of phosphatidylethanolamine and two unidentified polar lipids as major polar lipids; menaquinone-7 as the predominant quinone; and C 16:1 ω5c, C 16:0 N alcohol, and iso-C 15:0 as the major fatty acids also supported the affiliation of the isolate to the genus Larkinella. Based on its phenotypic properties and phylogenetic distinctiveness, strain 15J8-8 T should be classified in the genus Larkinella as representative of a novel species, for which the name Larkinella terrae sp. nov. is proposed. The type strain is 15J8-8 T (= KCTC 52001 T = JCM 31990 T ).

KW - Bacteroidetes

KW - Larkinella

KW - Soil bacteria

UR - https://www.scopus.com/pages/publications/85030861150

U2 - 10.1007/s10482-017-0955-y

DO - 10.1007/s10482-017-0955-y

M3 - Article

C2 - 29019013

AN - SCOPUS:85030861150

SN - 0003-6072

VL - 111

SP - 333

EP - 341

JO - Antonie van Leeuwenhoek

JF - Antonie van Leeuwenhoek

IS - 3

ER -

Larkinella terrae sp. nov., isolated from soil on Jeju Island, South Korea

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