Molecular characterization and genetic diversity of avian paramyxovirus type 4 isolated in South Korea from 2013 to 2017

Erdene Ochir Tseren-Ochir; Jung Hoon Kwon; Jin Yong Noh; Jei Hyun Jeong; Sol Jeong; Kyu Jik Kim; Ji Ho Lee; Jun Beom Kim; Yu Jin Kim; Sun Hak Lee; Jun Young Kim; Chang Seon Song

doi:10.1016/j.meegid.2018.03.025

Molecular characterization and genetic diversity of avian paramyxovirus type 4 isolated in South Korea from 2013 to 2017

Erdene Ochir Tseren-Ochir, Jung Hoon Kwon, Jin Yong Noh, Jei Hyun Jeong, Sol Jeong, Kyu Jik Kim, Ji Ho Lee, Jun Beom Kim, Yu Jin Kim, Sun Hak Lee, Jun Young Kim, Chang Seon Song

Department of Veterinary Medicine

Konkuk University

Research output: Contribution to journal › Article › peer-review

6 Scopus citations

Abstract

In recent years, avian paramyxovirus type 4 (APMV-4) frequently isolated from wild and domestic bird populations particularly waterfowls worldwide. However, molecular characteristics and genetic diversity of APMV-4 are uncertain, owing to the limited availability of sequence information. A total of 11 APMV-4 strains from 9850 fecal, swab, and environmental samples were isolated during the surveillance program in wintering seasons of 2013–2017 in South Korea. We performed genetic characterization and phylogenetic analysis to investigate the genetic diversity and relatedness between isolates from the region. We report high APMV-4 genetic diversity (multiple genotypes and sub-genotypes) among wild bird and poultry populations in Korea and that the potential virus exchange occurs between neighboring countries via wild bird migration. Furthermore, our study results suggest the possibility of transcontinental transmission of APMV-4 between Asia and Europe.

Original language	English
Pages (from-to)	127-133
Number of pages	7
Journal	Infection, Genetics and Evolution
Volume	61
DOIs	https://doi.org/10.1016/j.meegid.2018.03.025
State	Published - Jul 2018

Keywords

Avian paramyxovirus type 4
Genetic diversity
Korea
Phylogenetic analysis
Transcontinental transmission
Wild bird

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

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Tseren-Ochir, E. O., Kwon, J. H., Noh, J. Y., Jeong, J. H., Jeong, S., Kim, K. J., Lee, J. H., Kim, J. B., Kim, Y. J., Lee, S. H., Kim, J. Y., & Song, C. S. (2018). Molecular characterization and genetic diversity of avian paramyxovirus type 4 isolated in South Korea from 2013 to 2017. Infection, Genetics and Evolution, 61, 127-133. https://doi.org/10.1016/j.meegid.2018.03.025

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title = "Molecular characterization and genetic diversity of avian paramyxovirus type 4 isolated in South Korea from 2013 to 2017",

abstract = "In recent years, avian paramyxovirus type 4 (APMV-4) frequently isolated from wild and domestic bird populations particularly waterfowls worldwide. However, molecular characteristics and genetic diversity of APMV-4 are uncertain, owing to the limited availability of sequence information. A total of 11 APMV-4 strains from 9850 fecal, swab, and environmental samples were isolated during the surveillance program in wintering seasons of 2013–2017 in South Korea. We performed genetic characterization and phylogenetic analysis to investigate the genetic diversity and relatedness between isolates from the region. We report high APMV-4 genetic diversity (multiple genotypes and sub-genotypes) among wild bird and poultry populations in Korea and that the potential virus exchange occurs between neighboring countries via wild bird migration. Furthermore, our study results suggest the possibility of transcontinental transmission of APMV-4 between Asia and Europe.",

keywords = "Avian paramyxovirus type 4, Genetic diversity, Korea, Phylogenetic analysis, Transcontinental transmission, Wild bird",

author = "Tseren-Ochir, {Erdene Ochir} and Kwon, {Jung Hoon} and Noh, {Jin Yong} and Jeong, {Jei Hyun} and Sol Jeong and Kim, {Kyu Jik} and Lee, {Ji Ho} and Kim, {Jun Beom} and Kim, {Yu Jin} and Lee, {Sun Hak} and Kim, {Jun Young} and Song, {Chang Seon}",

note = "Publisher Copyright: {\textcopyright} 2018 Elsevier B.V.",

year = "2018",

month = jul,

doi = "10.1016/j.meegid.2018.03.025",

language = "English",

volume = "61",

pages = "127--133",

journal = "Infection, Genetics and Evolution",

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T1 - Molecular characterization and genetic diversity of avian paramyxovirus type 4 isolated in South Korea from 2013 to 2017

AU - Tseren-Ochir, Erdene Ochir

AU - Kwon, Jung Hoon

AU - Noh, Jin Yong

AU - Jeong, Jei Hyun

AU - Jeong, Sol

AU - Kim, Kyu Jik

AU - Lee, Ji Ho

AU - Kim, Jun Beom

AU - Kim, Yu Jin

AU - Lee, Sun Hak

AU - Kim, Jun Young

AU - Song, Chang Seon

PY - 2018/7

Y1 - 2018/7

N2 - In recent years, avian paramyxovirus type 4 (APMV-4) frequently isolated from wild and domestic bird populations particularly waterfowls worldwide. However, molecular characteristics and genetic diversity of APMV-4 are uncertain, owing to the limited availability of sequence information. A total of 11 APMV-4 strains from 9850 fecal, swab, and environmental samples were isolated during the surveillance program in wintering seasons of 2013–2017 in South Korea. We performed genetic characterization and phylogenetic analysis to investigate the genetic diversity and relatedness between isolates from the region. We report high APMV-4 genetic diversity (multiple genotypes and sub-genotypes) among wild bird and poultry populations in Korea and that the potential virus exchange occurs between neighboring countries via wild bird migration. Furthermore, our study results suggest the possibility of transcontinental transmission of APMV-4 between Asia and Europe.

AB - In recent years, avian paramyxovirus type 4 (APMV-4) frequently isolated from wild and domestic bird populations particularly waterfowls worldwide. However, molecular characteristics and genetic diversity of APMV-4 are uncertain, owing to the limited availability of sequence information. A total of 11 APMV-4 strains from 9850 fecal, swab, and environmental samples were isolated during the surveillance program in wintering seasons of 2013–2017 in South Korea. We performed genetic characterization and phylogenetic analysis to investigate the genetic diversity and relatedness between isolates from the region. We report high APMV-4 genetic diversity (multiple genotypes and sub-genotypes) among wild bird and poultry populations in Korea and that the potential virus exchange occurs between neighboring countries via wild bird migration. Furthermore, our study results suggest the possibility of transcontinental transmission of APMV-4 between Asia and Europe.

KW - Avian paramyxovirus type 4

KW - Genetic diversity

KW - Korea

KW - Phylogenetic analysis

KW - Transcontinental transmission

KW - Wild bird

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U2 - 10.1016/j.meegid.2018.03.025

DO - 10.1016/j.meegid.2018.03.025

M3 - Article

C2 - 29601871

AN - SCOPUS:85044976149

SN - 1567-1348

VL - 61

SP - 127

EP - 133

JO - Infection, Genetics and Evolution

JF - Infection, Genetics and Evolution

ER -

Molecular characterization and genetic diversity of avian paramyxovirus type 4 isolated in South Korea from 2013 to 2017

Abstract

Keywords

UN SDGs

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