TY - JOUR
T1 - Network analysis of hepatic genes responded to high-fat diet in C57BL/6J Mice
T2 - Nutrigenomics data mining from recent research findings
AU - Kim, Eun Jung
AU - Kim, Eunjung
AU - Kwon, Eun Young
AU - Jang, Hyun Seo
AU - Hur, Cheol Goo
AU - Choi, Myung Sook
PY - 2010/8/1
Y1 - 2010/8/1
N2 - Obesity and its associated complications, including diabetes, dyslipidemia, atherosclerosis, and some cancers, have been a global health problem with a rapid increase of the obese population. In this study, we selected 31 obesity candidate genes in the liver of high-fat-induced obese C57BL/6J mice through investigation of literature search and analyzed functional protein-protein interaction of the genes using the STRING database. Most of the obesity candidate genes were closely connected through lipid metabolism, and in particular acyl-coenzyme A oxidase 1 appeared to be a core obesity gene. Overall, genes involved in fatty acid β-oxidation, fatty acid synthesis, and gluconeogenesis were up-regulated, and genes involved in sterol biosynthesis, insulin signaling, and oxidative stress defense system were down-regulated with a high-fat diet. Future identification of core obesity genes and their functional targets is expected to provide a new way to prevent obesity by phytochemicals or functional foods on the basis of food and nutritional genomics.
AB - Obesity and its associated complications, including diabetes, dyslipidemia, atherosclerosis, and some cancers, have been a global health problem with a rapid increase of the obese population. In this study, we selected 31 obesity candidate genes in the liver of high-fat-induced obese C57BL/6J mice through investigation of literature search and analyzed functional protein-protein interaction of the genes using the STRING database. Most of the obesity candidate genes were closely connected through lipid metabolism, and in particular acyl-coenzyme A oxidase 1 appeared to be a core obesity gene. Overall, genes involved in fatty acid β-oxidation, fatty acid synthesis, and gluconeogenesis were up-regulated, and genes involved in sterol biosynthesis, insulin signaling, and oxidative stress defense system were down-regulated with a high-fat diet. Future identification of core obesity genes and their functional targets is expected to provide a new way to prevent obesity by phytochemicals or functional foods on the basis of food and nutritional genomics.
KW - high-fat diet
KW - nutrigenomics
KW - obesity
UR - http://www.scopus.com/inward/record.url?scp=77955207097&partnerID=8YFLogxK
U2 - 10.1089/jmf.2009.1350
DO - 10.1089/jmf.2009.1350
M3 - Review article
C2 - 20553184
AN - SCOPUS:77955207097
SN - 1096-620X
VL - 13
SP - 743
EP - 756
JO - Journal of Medicinal Food
JF - Journal of Medicinal Food
IS - 4
ER -