Phylogenetic diversity and UV resistance analysis of radiation-resistant bacteria isolated from the water in Han River

Jae Jin Lee, Eun Sun Joo, Do Hee Lee, Hee Young Jung, Myung Kyum Kim

Research output: Contribution to journalArticlepeer-review

2 Scopus citations

Abstract

The aim of this study was to investigate the UV-resistance of radiation-resistant bacteria isolated from the water of Han River, South Korea. The water sample was irradiated with 3 kGy gamma radiation prior to isolation. Radiation-resistant bacterial strains were isolated by standard serial dilution method on R2A and 1/10 diluted R2A agar. The resulting purely isolated 60 cultures of bacteria were analysed for UV resistance and used in further studies. Based on the comparative analyses of 16S rRNA gene sequences, the bacterial isolates were divided into 3 phyla (4 genera): The phylum Deinococcus-Thermus (the genus Deinococcus) was 61.7%, Bacteroidetes (Hymenobacter and Spirosoma) was 23.4%, and Firmicutes (Exiguobacterium) was 15%. The results suggested that twenty-nine isolates are candidates new species belonging to Deinococcus, Hymenobacter, and Spirosoma, or other new genera. Nine bacterial strains were selected among the novel candidates and the UV-resistance analysis was conducted. All the candidate bacterial strains showed high UV resistance, similar to that of D. radiodurans R1.

Original languageEnglish
Pages (from-to)65-73
Number of pages9
JournalKorean Journal of Microbiology
Volume52
Issue number1
DOIs
StatePublished - 1 Mar 2016

Keywords

  • 16S rDNA
  • Han River
  • Phylogenetic tree
  • Radiation-resistant bacteria
  • UV resistance analysis
  • Water

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