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Prototropically Controlled Dynamics of Cytosine Photodecay

  • Saima Sadiq
  • , Woojin Park
  • , Vladimir Mironov
  • , Seunghoon Lee
  • , Michael Filatov
  • , Cheol Ho Choi
  • Kyungpook National University
  • California Institute of Technology

Research output: Contribution to journalArticlepeer-review

16 Scopus citations

Abstract

The effect of the existence of several prototropic tautomers of cytosine on its UV/vis spectra and the excited state decay dynamics is studied by spectral and nonadiabatic molecular dynamics (NAMD) simulations in connection with the mixed-reference spin-flip time-dependent density functional theory (MRSF-TDDFT) method. Simulated UV/vis spectra provide a strong indication that the H3N keto-amino cytosine tautomer (the least anticipated species) may be present under experimental conditions. The NAMD simulations yield a wide range of excited state decay constants for various tautomers of cytosine, ranging from ∼1.3 ps for the biologically relevant H1N keto-amino tautomer to ∼0.1 ps for the keto-imino tautomer. The slowness of the H1N decay dynamics follows from the presence of a barrier on the excited state energy surface separating the Franck-Condon structure from the major decay funnel, the conical intersection seam. It is suggested that the experimentally observed photodecay dynamics may result from a combination of the decay processes of various tautomers (H3N in particular) present simultaneously under the experimental conditions.

Original languageEnglish
Pages (from-to)791-797
Number of pages7
JournalJournal of Physical Chemistry Letters
Volume14
Issue number3
DOIs
StatePublished - 26 Jan 2023

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