Pseudoclavibacter soli sp. nov., a β-glucosidase-producing bacterium

Myung Kyum Kim; Hee Young Jung

doi:10.1099/ijs.0.65627-0

Pseudoclavibacter soli sp. nov., a β-glucosidase-producing bacterium

Myung Kyum Kim
, Hee Young Jung

Department of Plant Medicine

Seoul Women's University

Research output: Contribution to journal › Article › peer-review

17 Scopus citations

Abstract

A Gram-positive, aerobic, rod-shaped and non-motile bacterium, designated strain KP02^T, was isolated from soil from a ginseng field in Daejeon, South Korea. On the basis of 16S rRNA gene sequence similarity, this strain was shown to be related to 'Pseudoclavibacter alba' NBRC 15616 (95.5 %), 'Pseudoclavibacter faecalis' NBRC 15706 (93.9 %), Pseudoclavibacter helvolus DSM 20419^T (93.7 %) and 'Pseudoclavibacter bifida' IAM 14848 (93.0 %). Chemotaxonomic data revealed that strain KP02^T possessed MK-9 and MK-8 as major menaquinones and anteiso-C_15:0, anteiso-C_17:0, iso-C_16:0 and C_16:0 as predominant fatty acids. The genomic DNA G+C content of strain KP02^T was 64.4 mol%. The physiological and biochemical tests suggested that strain KP02^T represents a novel species. Based on these data, strain KP02^T (=KCTC 19255^T=JCM 15058^T) should be classified as the type strain of a novel Pseudoclavibacter species, for which the name Pseudoclavibacter soli sp. nov. is proposed.

Original language	English
Pages (from-to)	835-838
Number of pages	4
Journal	International Journal of Systematic and Evolutionary Microbiology
Volume	59
Issue number	4
DOIs	https://doi.org/10.1099/ijs.0.65627-0
State	Published - 2009

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title = "Pseudoclavibacter soli sp. nov., a β-glucosidase-producing bacterium",

abstract = "A Gram-positive, aerobic, rod-shaped and non-motile bacterium, designated strain KP02T, was isolated from soil from a ginseng field in Daejeon, South Korea. On the basis of 16S rRNA gene sequence similarity, this strain was shown to be related to 'Pseudoclavibacter alba' NBRC 15616 (95.5 \%), 'Pseudoclavibacter faecalis' NBRC 15706 (93.9 \%), Pseudoclavibacter helvolus DSM 20419T (93.7 \%) and 'Pseudoclavibacter bifida' IAM 14848 (93.0 \%). Chemotaxonomic data revealed that strain KP02T possessed MK-9 and MK-8 as major menaquinones and anteiso-C15:0, anteiso-C17:0, iso-C16:0 and C16:0 as predominant fatty acids. The genomic DNA G+C content of strain KP02T was 64.4 mol\%. The physiological and biochemical tests suggested that strain KP02T represents a novel species. Based on these data, strain KP02T (=KCTC 19255T=JCM 15058T) should be classified as the type strain of a novel Pseudoclavibacter species, for which the name Pseudoclavibacter soli sp. nov. is proposed.",

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year = "2009",

doi = "10.1099/ijs.0.65627-0",

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journal = "International Journal of Systematic and Evolutionary Microbiology",

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AU - Kim, Myung Kyum

AU - Jung, Hee Young

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N2 - A Gram-positive, aerobic, rod-shaped and non-motile bacterium, designated strain KP02T, was isolated from soil from a ginseng field in Daejeon, South Korea. On the basis of 16S rRNA gene sequence similarity, this strain was shown to be related to 'Pseudoclavibacter alba' NBRC 15616 (95.5 %), 'Pseudoclavibacter faecalis' NBRC 15706 (93.9 %), Pseudoclavibacter helvolus DSM 20419T (93.7 %) and 'Pseudoclavibacter bifida' IAM 14848 (93.0 %). Chemotaxonomic data revealed that strain KP02T possessed MK-9 and MK-8 as major menaquinones and anteiso-C15:0, anteiso-C17:0, iso-C16:0 and C16:0 as predominant fatty acids. The genomic DNA G+C content of strain KP02T was 64.4 mol%. The physiological and biochemical tests suggested that strain KP02T represents a novel species. Based on these data, strain KP02T (=KCTC 19255T=JCM 15058T) should be classified as the type strain of a novel Pseudoclavibacter species, for which the name Pseudoclavibacter soli sp. nov. is proposed.

AB - A Gram-positive, aerobic, rod-shaped and non-motile bacterium, designated strain KP02T, was isolated from soil from a ginseng field in Daejeon, South Korea. On the basis of 16S rRNA gene sequence similarity, this strain was shown to be related to 'Pseudoclavibacter alba' NBRC 15616 (95.5 %), 'Pseudoclavibacter faecalis' NBRC 15706 (93.9 %), Pseudoclavibacter helvolus DSM 20419T (93.7 %) and 'Pseudoclavibacter bifida' IAM 14848 (93.0 %). Chemotaxonomic data revealed that strain KP02T possessed MK-9 and MK-8 as major menaquinones and anteiso-C15:0, anteiso-C17:0, iso-C16:0 and C16:0 as predominant fatty acids. The genomic DNA G+C content of strain KP02T was 64.4 mol%. The physiological and biochemical tests suggested that strain KP02T represents a novel species. Based on these data, strain KP02T (=KCTC 19255T=JCM 15058T) should be classified as the type strain of a novel Pseudoclavibacter species, for which the name Pseudoclavibacter soli sp. nov. is proposed.

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DO - 10.1099/ijs.0.65627-0

M3 - Article

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AN - SCOPUS:66149149878

SN - 1466-5026

VL - 59

SP - 835

EP - 838

JO - International Journal of Systematic and Evolutionary Microbiology

JF - International Journal of Systematic and Evolutionary Microbiology

IS - 4

ER -

Pseudoclavibacter soli sp. nov., a β-glucosidase-producing bacterium

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