TY - JOUR
T1 - Spirosoma koreense sp. Nov., a species of the family cytophagaceae isolated from beach soil
AU - Ten, Leonid N.
AU - Okiria, Joseph
AU - Lee, Jae Jin
AU - Lee, Seung Yeol
AU - Kang, In Kyu
AU - Lee, Dae Sung
AU - Jung, Hee Young
N1 - Publisher Copyright:
© 2017 IUMS.
PY - 2017/12
Y1 - 2017/12
N2 - A Gram-stain-negative, non-motile, non-spore-forming, rod-shaped, aerobic bacterium, designated 15J8-5T, was isolated from beach soil on Jeju Island, Republic of Korea. The isolate grew at 10–37 °C (optimal 25 °C), pH 6–8 (optimal pH 7) and in the presence of 0–1% (w/v) NaCl. The results of comparative 16S rRNA gene sequence analysis indicated that strain 15J8-5T represented a member of the family Cytophagaceae, phylum Bacteroidetes and was most closely related to Spirosoma knui 15J8-12T (93.1% similarity), Spirosoma spitsbergense SPM-9T (93.1 %) and Spirosoma endophyticum EX36T (93.1 %). The G+C content of the genomic DNA of the novel strain was 48.0 mol%. The isolate contained menaquinone MK-7 as the predominant respiratory quinone, phosphatidylethanolamine as the major polar lipid, and summed feature 3 (C16: 1 ω7c/C16: 1ω6c; 32.8 %), C16: 1ω5c (24.8 %) and C16: 0 (11.7 %) as the major fatty acids, which supported the affiliation of strain 15J8-5T to the genus Spirosoma. The results of physiological and biochemical tests allowed genotypic and phenotypic differentiation of strain 15J8-5T from members of the genus Spirosoma. Based on its phenotypic properties and phylogenetic distinctiveness, strain 15J8-5T represents a novel species of the genus Spirosoma, for which the name Spirosoma koreense sp. nov. is proposed. The type strain is 15J8-5T (=KCTC 52027T=JCM 31992T).
AB - A Gram-stain-negative, non-motile, non-spore-forming, rod-shaped, aerobic bacterium, designated 15J8-5T, was isolated from beach soil on Jeju Island, Republic of Korea. The isolate grew at 10–37 °C (optimal 25 °C), pH 6–8 (optimal pH 7) and in the presence of 0–1% (w/v) NaCl. The results of comparative 16S rRNA gene sequence analysis indicated that strain 15J8-5T represented a member of the family Cytophagaceae, phylum Bacteroidetes and was most closely related to Spirosoma knui 15J8-12T (93.1% similarity), Spirosoma spitsbergense SPM-9T (93.1 %) and Spirosoma endophyticum EX36T (93.1 %). The G+C content of the genomic DNA of the novel strain was 48.0 mol%. The isolate contained menaquinone MK-7 as the predominant respiratory quinone, phosphatidylethanolamine as the major polar lipid, and summed feature 3 (C16: 1 ω7c/C16: 1ω6c; 32.8 %), C16: 1ω5c (24.8 %) and C16: 0 (11.7 %) as the major fatty acids, which supported the affiliation of strain 15J8-5T to the genus Spirosoma. The results of physiological and biochemical tests allowed genotypic and phenotypic differentiation of strain 15J8-5T from members of the genus Spirosoma. Based on its phenotypic properties and phylogenetic distinctiveness, strain 15J8-5T represents a novel species of the genus Spirosoma, for which the name Spirosoma koreense sp. nov. is proposed. The type strain is 15J8-5T (=KCTC 52027T=JCM 31992T).
KW - Bacteroidetes
KW - Polyphasic taxonomy
KW - Spirosoma
UR - http://www.scopus.com/inward/record.url?scp=85037717371&partnerID=8YFLogxK
U2 - 10.1099/ijsem.0.002440
DO - 10.1099/ijsem.0.002440
M3 - Article
C2 - 29058653
AN - SCOPUS:85037717371
SN - 1466-5026
VL - 67
SP - 5198
EP - 5204
JO - International Journal of Systematic and Evolutionary Microbiology
JF - International Journal of Systematic and Evolutionary Microbiology
IS - 12
M1 - 002440
ER -