The chloroplast genome sequence of an aquatic plant, Sparganium eurycarpum subsp. coreanum (Typhaceae)

Hee Young Gil; Young Ho Ha; Kyoung Su Choi; Jung Sim Lee; Kae Sun Chang; Kyung Choi

doi:10.1080/23802359.2019.1572471

The chloroplast genome sequence of an aquatic plant, Sparganium eurycarpum subsp. coreanum (Typhaceae)

Hee Young Gil
, Young Ho Ha
, Kyoung Su Choi
, Jung Sim Lee
, Kae Sun Chang
, Kyung Choi

Department of Biology

Korea National Arboretum

Research output: Contribution to journal › Article › peer-review

3 Scopus citations

Abstract

The complete chloroplast genome sequence of Sparganium eurycarpum subsp. coreanum was determined. The genome size was 161,761 bp in length with 36.9% GC content. It included a pair of inverted repeats (IRa and IRb) of 26,886 bp, which were separated by small single copy (SSC: 19,029 bp) and large single copy (LSC: 88,960 bp) regions. The cp genome contained 112 genes, including 79 protein-coding genes, 29 tRNA genes, and 4 rRNA genes. Phylogenetic analysis of the combined 79 protein-coding genes showed that S. eurycarpum subsp. coreanum was most closely related to Typha latifolia.

Original language	English
Pages (from-to)	684-685
Number of pages	2
Journal	Mitochondrial DNA Part B: Resources
Volume	4
Issue number	1
DOIs	https://doi.org/10.1080/23802359.2019.1572471
State	Published - 2 Jan 2019

Keywords

Chloroplast genome
Poales
Sparganium eurycarpum subsp. coreanum
Typhaceae

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10.1080/23802359.2019.1572471

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title = "The chloroplast genome sequence of an aquatic plant, Sparganium eurycarpum subsp. coreanum (Typhaceae)",

abstract = "The complete chloroplast genome sequence of Sparganium eurycarpum subsp. coreanum was determined. The genome size was 161,761 bp in length with 36.9\% GC content. It included a pair of inverted repeats (IRa and IRb) of 26,886 bp, which were separated by small single copy (SSC: 19,029 bp) and large single copy (LSC: 88,960 bp) regions. The cp genome contained 112 genes, including 79 protein-coding genes, 29 tRNA genes, and 4 rRNA genes. Phylogenetic analysis of the combined 79 protein-coding genes showed that S. eurycarpum subsp. coreanum was most closely related to Typha latifolia.",

keywords = "Chloroplast genome, Poales, Sparganium eurycarpum subsp. coreanum, Typhaceae",

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year = "2019",

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doi = "10.1080/23802359.2019.1572471",

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T1 - The chloroplast genome sequence of an aquatic plant, Sparganium eurycarpum subsp. coreanum (Typhaceae)

AU - Gil, Hee Young

AU - Ha, Young Ho

AU - Choi, Kyoung Su

AU - Lee, Jung Sim

AU - Chang, Kae Sun

AU - Choi, Kyung

PY - 2019/1/2

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N2 - The complete chloroplast genome sequence of Sparganium eurycarpum subsp. coreanum was determined. The genome size was 161,761 bp in length with 36.9% GC content. It included a pair of inverted repeats (IRa and IRb) of 26,886 bp, which were separated by small single copy (SSC: 19,029 bp) and large single copy (LSC: 88,960 bp) regions. The cp genome contained 112 genes, including 79 protein-coding genes, 29 tRNA genes, and 4 rRNA genes. Phylogenetic analysis of the combined 79 protein-coding genes showed that S. eurycarpum subsp. coreanum was most closely related to Typha latifolia.

AB - The complete chloroplast genome sequence of Sparganium eurycarpum subsp. coreanum was determined. The genome size was 161,761 bp in length with 36.9% GC content. It included a pair of inverted repeats (IRa and IRb) of 26,886 bp, which were separated by small single copy (SSC: 19,029 bp) and large single copy (LSC: 88,960 bp) regions. The cp genome contained 112 genes, including 79 protein-coding genes, 29 tRNA genes, and 4 rRNA genes. Phylogenetic analysis of the combined 79 protein-coding genes showed that S. eurycarpum subsp. coreanum was most closely related to Typha latifolia.

KW - Chloroplast genome

KW - Poales

KW - Sparganium eurycarpum subsp. coreanum

KW - Typhaceae

UR - https://www.scopus.com/pages/publications/85061076868

U2 - 10.1080/23802359.2019.1572471

DO - 10.1080/23802359.2019.1572471

M3 - Article

AN - SCOPUS:85061076868

SN - 2380-2359

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JO - Mitochondrial DNA Part B: Resources

JF - Mitochondrial DNA Part B: Resources

IS - 1

ER -

The chloroplast genome sequence of an aquatic plant, Sparganium eurycarpum subsp. coreanum (Typhaceae)

Abstract

Keywords

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