The complete chloroplast genome sequence of Euonymus japonicus (Celastraceae)

Kyoung Su Choi; Seon Joo Park

doi:10.3109/19401736.2015.1075127

The complete chloroplast genome sequence of Euonymus japonicus (Celastraceae)

Kyoung Su Choi, Seon Joo Park

Department of Biology

Yeungnam University

Research output: Contribution to journal › Article › peer-review

12 Scopus citations

Abstract

The complete chloroplast (cp) genome sequence of the Euonymus japonicus, the first sequenced of the genus Euonymus, was reported in this study. The total length was 157 637 bp, containing a pair of 26 678 bp inverted repeat region (IR), which were separated by small single copy (SSC) region and large single copy (LSC) region of 18 340 bp and 85 941 bp, respectively. This genome contains 107 unique genes, including 74 coding genes, four rRNA genes, and 29 tRNA genes. Seventeen genes contain intron of E. japonicus, of which three genes (clpP, ycf3, and rps12) include two introns. The maximum likelihood (ML) phylogenetic analysis revealed that E. japonicus was closely related to Manihot and Populus.

Original language	English
Pages (from-to)	3577-3578
Number of pages	2
Journal	Mitochondrial DNA
Volume	27
Issue number	5
DOIs	https://doi.org/10.3109/19401736.2015.1075127
State	Published - 27 Aug 2016

Keywords

Celastraceae
Chloroplast genome
Euonymus japonicus

Access to Document

10.3109/19401736.2015.1075127

Cite this

@article{a239323271a74c1b96d174775a627980,

title = "The complete chloroplast genome sequence of Euonymus japonicus (Celastraceae)",

abstract = "The complete chloroplast (cp) genome sequence of the Euonymus japonicus, the first sequenced of the genus Euonymus, was reported in this study. The total length was 157 637 bp, containing a pair of 26 678 bp inverted repeat region (IR), which were separated by small single copy (SSC) region and large single copy (LSC) region of 18 340 bp and 85 941 bp, respectively. This genome contains 107 unique genes, including 74 coding genes, four rRNA genes, and 29 tRNA genes. Seventeen genes contain intron of E. japonicus, of which three genes (clpP, ycf3, and rps12) include two introns. The maximum likelihood (ML) phylogenetic analysis revealed that E. japonicus was closely related to Manihot and Populus.",

keywords = "Celastraceae, Chloroplast genome, Euonymus japonicus",

author = "Choi, {Kyoung Su} and Park, {Seon Joo}",

note = "Publisher Copyright: {\textcopyright} 2015 Taylor & Francis.",

year = "2016",

month = aug,

day = "27",

doi = "10.3109/19401736.2015.1075127",

language = "English",

volume = "27",

pages = "3577--3578",

journal = "Mitochondrial DNA",

issn = "1940-1736",

publisher = "Informa Healthcare",

number = "5",

}

TY - JOUR

T1 - The complete chloroplast genome sequence of Euonymus japonicus (Celastraceae)

AU - Choi, Kyoung Su

AU - Park, Seon Joo

PY - 2016/8/27

Y1 - 2016/8/27

N2 - The complete chloroplast (cp) genome sequence of the Euonymus japonicus, the first sequenced of the genus Euonymus, was reported in this study. The total length was 157 637 bp, containing a pair of 26 678 bp inverted repeat region (IR), which were separated by small single copy (SSC) region and large single copy (LSC) region of 18 340 bp and 85 941 bp, respectively. This genome contains 107 unique genes, including 74 coding genes, four rRNA genes, and 29 tRNA genes. Seventeen genes contain intron of E. japonicus, of which three genes (clpP, ycf3, and rps12) include two introns. The maximum likelihood (ML) phylogenetic analysis revealed that E. japonicus was closely related to Manihot and Populus.

AB - The complete chloroplast (cp) genome sequence of the Euonymus japonicus, the first sequenced of the genus Euonymus, was reported in this study. The total length was 157 637 bp, containing a pair of 26 678 bp inverted repeat region (IR), which were separated by small single copy (SSC) region and large single copy (LSC) region of 18 340 bp and 85 941 bp, respectively. This genome contains 107 unique genes, including 74 coding genes, four rRNA genes, and 29 tRNA genes. Seventeen genes contain intron of E. japonicus, of which three genes (clpP, ycf3, and rps12) include two introns. The maximum likelihood (ML) phylogenetic analysis revealed that E. japonicus was closely related to Manihot and Populus.

KW - Celastraceae

KW - Chloroplast genome

KW - Euonymus japonicus

UR - http://www.scopus.com/inward/record.url?scp=84940704065&partnerID=8YFLogxK

U2 - 10.3109/19401736.2015.1075127

DO - 10.3109/19401736.2015.1075127

M3 - Article

C2 - 26407184

AN - SCOPUS:84940704065

SN - 1940-1736

VL - 27

SP - 3577

EP - 3578

JO - Mitochondrial DNA

JF - Mitochondrial DNA

IS - 5

ER -

The complete chloroplast genome sequence of Euonymus japonicus (Celastraceae)

Abstract

Keywords

Access to Document

Other files and links

Fingerprint

Cite this