The complete chloroplast genome sequence of Liparis yongnoana, an endemic orchid of Korea

Young Ho Ha; Hee Young Gil; Jungsim Lee; Dong Kap Kim; Kyung Choi; Kae Sun Chang; Seung Hwan Oh

doi:10.1080/23802359.2019.1644220

The complete chloroplast genome sequence of Liparis yongnoana, an endemic orchid of Korea

Young Ho Ha, Hee Young Gil, Jungsim Lee, Dong Kap Kim, Kyung Choi, Kae Sun Chang, Seung Hwan Oh

School of Forest Sciences and Landscape

Research output: Contribution to journal › Article › peer-review

3 Scopus citations

Abstract

The complete chloroplast genome sequence of Liparis yongnoana was determined and analyzed in this study. The chloroplast genome size is 153,165 bp in length with 36.9% GC content. It comprises a large single-copy region (LSC) of 83,690 bp, a small single copy region (SSC) of 17,661 bp, and a pair of inverted repeat regions (IRa and IRb) of 25,907 bp separated by the SSC. The genome contains 132 genes, including 86 protein-coding, eight ribosomal RNA, and 38 transfer RNA genes. Phylogenetic analysis inferred from 16 Orchidaceae chloroplast genomes suggested that L. yongnoana was closely related to L. loeselii.

Original language	English
Pages (from-to)	2666-2667
Number of pages	2
Journal	Mitochondrial DNA Part B: Resources
Volume	4
Issue number	2
DOIs	https://doi.org/10.1080/23802359.2019.1644220
State	Published - 3 Jul 2019

Keywords

Chloroplast genome
Liparis yongnoana
Orchidaceae
endemic species

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10.1080/23802359.2019.1644220

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title = "The complete chloroplast genome sequence of Liparis yongnoana, an endemic orchid of Korea",

abstract = "The complete chloroplast genome sequence of Liparis yongnoana was determined and analyzed in this study. The chloroplast genome size is 153,165 bp in length with 36.9\% GC content. It comprises a large single-copy region (LSC) of 83,690 bp, a small single copy region (SSC) of 17,661 bp, and a pair of inverted repeat regions (IRa and IRb) of 25,907 bp separated by the SSC. The genome contains 132 genes, including 86 protein-coding, eight ribosomal RNA, and 38 transfer RNA genes. Phylogenetic analysis inferred from 16 Orchidaceae chloroplast genomes suggested that L. yongnoana was closely related to L. loeselii.",

keywords = "Chloroplast genome, Liparis yongnoana, Orchidaceae, endemic species",

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doi = "10.1080/23802359.2019.1644220",

language = "English",

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T1 - The complete chloroplast genome sequence of Liparis yongnoana, an endemic orchid of Korea

AU - Ha, Young Ho

AU - Gil, Hee Young

AU - Lee, Jungsim

AU - Kim, Dong Kap

AU - Choi, Kyung

AU - Chang, Kae Sun

AU - Oh, Seung Hwan

PY - 2019/7/3

Y1 - 2019/7/3

N2 - The complete chloroplast genome sequence of Liparis yongnoana was determined and analyzed in this study. The chloroplast genome size is 153,165 bp in length with 36.9% GC content. It comprises a large single-copy region (LSC) of 83,690 bp, a small single copy region (SSC) of 17,661 bp, and a pair of inverted repeat regions (IRa and IRb) of 25,907 bp separated by the SSC. The genome contains 132 genes, including 86 protein-coding, eight ribosomal RNA, and 38 transfer RNA genes. Phylogenetic analysis inferred from 16 Orchidaceae chloroplast genomes suggested that L. yongnoana was closely related to L. loeselii.

AB - The complete chloroplast genome sequence of Liparis yongnoana was determined and analyzed in this study. The chloroplast genome size is 153,165 bp in length with 36.9% GC content. It comprises a large single-copy region (LSC) of 83,690 bp, a small single copy region (SSC) of 17,661 bp, and a pair of inverted repeat regions (IRa and IRb) of 25,907 bp separated by the SSC. The genome contains 132 genes, including 86 protein-coding, eight ribosomal RNA, and 38 transfer RNA genes. Phylogenetic analysis inferred from 16 Orchidaceae chloroplast genomes suggested that L. yongnoana was closely related to L. loeselii.

KW - Chloroplast genome

KW - Liparis yongnoana

KW - Orchidaceae

KW - endemic species

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DO - 10.1080/23802359.2019.1644220

M3 - Article

AN - SCOPUS:85069769351

SN - 2380-2359

VL - 4

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JO - Mitochondrial DNA Part B: Resources

JF - Mitochondrial DNA Part B: Resources

IS - 2

ER -

The complete chloroplast genome sequence of Liparis yongnoana, an endemic orchid of Korea

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Keywords

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