The complete mitochondrial genome sequence of Squalidus japonicus coreanus (Teleostei, Cypriniformes, Cyprinidae)

Chang Eon Park; Gun Seok Park; Yunyoung Kwak; Min Chul Kim; Kgu Hwan Kim; Hee Cheon Park; Jae Ho Shin

doi:10.3109/19401736.2015.1079875

The complete mitochondrial genome sequence of Squalidus japonicus coreanus (Teleostei, Cypriniformes, Cyprinidae)

Chang Eon Park, Gun Seok Park, Yunyoung Kwak, Min Chul Kim, Kgu Hwan Kim, Hee Cheon Park, Jae Ho Shin

School of Applied Bioscience

Research output: Contribution to journal › Article › peer-review

1 Scopus citations

Abstract

The short-barbel gudgeon Squalidus japonicus coreanus (Teleostei, Cypriniformes, Cyprinidae) is a subspecies of S. japonicus, and is endemic to Korea. The complete mitochondrial genome sequence consisted of 16 597 base pairs (bp) encoding 13 protein-coding genes (PCGs), two ribosomal RNAs (rRNAs), 22 transfer RNAs (tRNAs), and two non-coding regions. The overall base composition of S. japonicus coreanus was G + C: 47.4% and A + T: 52.6%, apparently with a slight AT bias. Phylogenetic analysis showed that S. japonicus coreanus was closely related to Pungtungia herzi.

Original language	English
Pages (from-to)	3723-3724
Number of pages	2
Journal	Mitochondrial DNA
Volume	27
Issue number	5
DOIs	https://doi.org/10.3109/19401736.2015.1079875
State	Published - 1 Sep 2016

Keywords

Cyprinidae
Korean endemic species
Short-barbel gudgeon
Squalidus japonicus coreanus

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10.3109/19401736.2015.1079875

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title = "The complete mitochondrial genome sequence of Squalidus japonicus coreanus (Teleostei, Cypriniformes, Cyprinidae)",

abstract = "The short-barbel gudgeon Squalidus japonicus coreanus (Teleostei, Cypriniformes, Cyprinidae) is a subspecies of S. japonicus, and is endemic to Korea. The complete mitochondrial genome sequence consisted of 16 597 base pairs (bp) encoding 13 protein-coding genes (PCGs), two ribosomal RNAs (rRNAs), 22 transfer RNAs (tRNAs), and two non-coding regions. The overall base composition of S. japonicus coreanus was G + C: 47.4% and A + T: 52.6%, apparently with a slight AT bias. Phylogenetic analysis showed that S. japonicus coreanus was closely related to Pungtungia herzi.",

keywords = "Cyprinidae, Korean endemic species, Short-barbel gudgeon, Squalidus japonicus coreanus",

author = "Park, {Chang Eon} and Park, {Gun Seok} and Yunyoung Kwak and Kim, {Min Chul} and Kim, {Kgu Hwan} and Park, {Hee Cheon} and Shin, {Jae Ho}",

note = "Publisher Copyright: {\textcopyright} 2015 Taylor & Francis.",

year = "2016",

month = sep,

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doi = "10.3109/19401736.2015.1079875",

language = "English",

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T1 - The complete mitochondrial genome sequence of Squalidus japonicus coreanus (Teleostei, Cypriniformes, Cyprinidae)

AU - Park, Chang Eon

AU - Park, Gun Seok

AU - Kwak, Yunyoung

AU - Kim, Min Chul

AU - Kim, Kgu Hwan

AU - Park, Hee Cheon

AU - Shin, Jae Ho

PY - 2016/9/1

Y1 - 2016/9/1

N2 - The short-barbel gudgeon Squalidus japonicus coreanus (Teleostei, Cypriniformes, Cyprinidae) is a subspecies of S. japonicus, and is endemic to Korea. The complete mitochondrial genome sequence consisted of 16 597 base pairs (bp) encoding 13 protein-coding genes (PCGs), two ribosomal RNAs (rRNAs), 22 transfer RNAs (tRNAs), and two non-coding regions. The overall base composition of S. japonicus coreanus was G + C: 47.4% and A + T: 52.6%, apparently with a slight AT bias. Phylogenetic analysis showed that S. japonicus coreanus was closely related to Pungtungia herzi.

AB - The short-barbel gudgeon Squalidus japonicus coreanus (Teleostei, Cypriniformes, Cyprinidae) is a subspecies of S. japonicus, and is endemic to Korea. The complete mitochondrial genome sequence consisted of 16 597 base pairs (bp) encoding 13 protein-coding genes (PCGs), two ribosomal RNAs (rRNAs), 22 transfer RNAs (tRNAs), and two non-coding regions. The overall base composition of S. japonicus coreanus was G + C: 47.4% and A + T: 52.6%, apparently with a slight AT bias. Phylogenetic analysis showed that S. japonicus coreanus was closely related to Pungtungia herzi.

KW - Cyprinidae

KW - Korean endemic species

KW - Short-barbel gudgeon

KW - Squalidus japonicus coreanus

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DO - 10.3109/19401736.2015.1079875

M3 - Article

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AN - SCOPUS:84940704928

SN - 1940-1736

VL - 27

SP - 3723

EP - 3724

JO - Mitochondrial DNA

JF - Mitochondrial DNA

IS - 5

ER -

The complete mitochondrial genome sequence of Squalidus japonicus coreanus (Teleostei, Cypriniformes, Cyprinidae)

Abstract

Keywords

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