The complete mitochondrial genome sequence of Squalidus japonicus coreanus (Teleostei, Cypriniformes, Cyprinidae)

Chang Eon Park; Gun Seok Park; Yunyoung Kwak; Min Chul Kim; Kgu Hwan Kim; Hee Cheon Park; Jae Ho Shin

doi:10.3109/19401736.2015.1079875

The complete mitochondrial genome sequence of Squalidus japonicus coreanus (Teleostei, Cypriniformes, Cyprinidae)

Chang Eon Park
, Gun Seok Park
, Yunyoung Kwak
, Min Chul Kim
, Kgu Hwan Kim
, Hee Cheon Park
, Jae Ho Shin

School of Applied Bioscience

Research output: Contribution to journal › Article › peer-review

1 Scopus citations

Abstract

The short-barbel gudgeon Squalidus japonicus coreanus (Teleostei, Cypriniformes, Cyprinidae) is a subspecies of S. japonicus, and is endemic to Korea. The complete mitochondrial genome sequence consisted of 16 597 base pairs (bp) encoding 13 protein-coding genes (PCGs), two ribosomal RNAs (rRNAs), 22 transfer RNAs (tRNAs), and two non-coding regions. The overall base composition of S. japonicus coreanus was G + C: 47.4% and A + T: 52.6%, apparently with a slight AT bias. Phylogenetic analysis showed that S. japonicus coreanus was closely related to Pungtungia herzi.

Original language	English
Pages (from-to)	3723-3724
Number of pages	2
Journal	Mitochondrial DNA
Volume	27
Issue number	5
DOIs	https://doi.org/10.3109/19401736.2015.1079875
State	Published - 1 Sep 2016

Keywords

Cyprinidae
Korean endemic species
Short-barbel gudgeon
Squalidus japonicus coreanus

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10.3109/19401736.2015.1079875

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title = "The complete mitochondrial genome sequence of Squalidus japonicus coreanus (Teleostei, Cypriniformes, Cyprinidae)",

abstract = "The short-barbel gudgeon Squalidus japonicus coreanus (Teleostei, Cypriniformes, Cyprinidae) is a subspecies of S. japonicus, and is endemic to Korea. The complete mitochondrial genome sequence consisted of 16 597 base pairs (bp) encoding 13 protein-coding genes (PCGs), two ribosomal RNAs (rRNAs), 22 transfer RNAs (tRNAs), and two non-coding regions. The overall base composition of S. japonicus coreanus was G + C: 47.4\% and A + T: 52.6\%, apparently with a slight AT bias. Phylogenetic analysis showed that S. japonicus coreanus was closely related to Pungtungia herzi.",

keywords = "Cyprinidae, Korean endemic species, Short-barbel gudgeon, Squalidus japonicus coreanus",

author = "Park, \{Chang Eon\} and Park, \{Gun Seok\} and Yunyoung Kwak and Kim, \{Min Chul\} and Kim, \{Kgu Hwan\} and Park, \{Hee Cheon\} and Shin, \{Jae Ho\}",

note = "Publisher Copyright: {\textcopyright} 2015 Taylor \& Francis.",

year = "2016",

month = sep,

day = "1",

doi = "10.3109/19401736.2015.1079875",

language = "English",

volume = "27",

pages = "3723--3724",

journal = "Mitochondrial DNA",

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TY - JOUR

T1 - The complete mitochondrial genome sequence of Squalidus japonicus coreanus (Teleostei, Cypriniformes, Cyprinidae)

AU - Park, Chang Eon

AU - Park, Gun Seok

AU - Kwak, Yunyoung

AU - Kim, Min Chul

AU - Kim, Kgu Hwan

AU - Park, Hee Cheon

AU - Shin, Jae Ho

PY - 2016/9/1

Y1 - 2016/9/1

N2 - The short-barbel gudgeon Squalidus japonicus coreanus (Teleostei, Cypriniformes, Cyprinidae) is a subspecies of S. japonicus, and is endemic to Korea. The complete mitochondrial genome sequence consisted of 16 597 base pairs (bp) encoding 13 protein-coding genes (PCGs), two ribosomal RNAs (rRNAs), 22 transfer RNAs (tRNAs), and two non-coding regions. The overall base composition of S. japonicus coreanus was G + C: 47.4% and A + T: 52.6%, apparently with a slight AT bias. Phylogenetic analysis showed that S. japonicus coreanus was closely related to Pungtungia herzi.

AB - The short-barbel gudgeon Squalidus japonicus coreanus (Teleostei, Cypriniformes, Cyprinidae) is a subspecies of S. japonicus, and is endemic to Korea. The complete mitochondrial genome sequence consisted of 16 597 base pairs (bp) encoding 13 protein-coding genes (PCGs), two ribosomal RNAs (rRNAs), 22 transfer RNAs (tRNAs), and two non-coding regions. The overall base composition of S. japonicus coreanus was G + C: 47.4% and A + T: 52.6%, apparently with a slight AT bias. Phylogenetic analysis showed that S. japonicus coreanus was closely related to Pungtungia herzi.

KW - Cyprinidae

KW - Korean endemic species

KW - Short-barbel gudgeon

KW - Squalidus japonicus coreanus

UR - https://www.scopus.com/pages/publications/84940704928

U2 - 10.3109/19401736.2015.1079875

DO - 10.3109/19401736.2015.1079875

M3 - Article

C2 - 26329666

AN - SCOPUS:84940704928

SN - 1940-1736

VL - 27

SP - 3723

EP - 3724

JO - Mitochondrial DNA

JF - Mitochondrial DNA

IS - 5

ER -

The complete mitochondrial genome sequence of Squalidus japonicus coreanus (Teleostei, Cypriniformes, Cyprinidae)

Abstract

Keywords

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