The complete nucleotide sequence and genome organization of lychnis mottle virus

Ran Hee Yoo; Fumei Zhao; Seungmo Lim; Davaajargal Igori; Su Heon Lee; Jae Sun Moon

doi:10.1007/s00705-015-2501-4

The complete nucleotide sequence and genome organization of lychnis mottle virus

Ran Hee Yoo
, Fumei Zhao
, Seungmo Lim
, Davaajargal Igori
, Su Heon Lee
, Jae Sun Moon

Department of Plant Medicine

University of Science and Technology UST
Korea Research Institute of Bioscience and Biotechnology

Research output: Contribution to journal › Article › peer-review

15 Scopus citations

Abstract

The complete genomic sequence of lychnis mottle virus (LycMoV) from a Lychnis cognata plant was determined. LycMoV has a bipartite genome consisting of RNA1 (7,428 nt) and RNA2 (3,734 nt). Species in the family Secoviridae are demarcated based on their amino acid similarities in the protease-polymerase and coat protein. In LycMoV, these proteins share 90 % and 63 % sequence similarity, respectively, with the most closely related virus, strawberry latent ringspot virus, which is a member of the family Secoviridae but has not been assigned to a genus. Therefore, LycMoV is a tentative new virus of the family Secoviridae.

Original language	English
Pages (from-to)	2891-2894
Number of pages	4
Journal	Archives of Virology
Volume	160
Issue number	11
DOIs	https://doi.org/10.1007/s00705-015-2501-4
State	Published - 11 Aug 2015

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title = "The complete nucleotide sequence and genome organization of lychnis mottle virus",

abstract = "The complete genomic sequence of lychnis mottle virus (LycMoV) from a Lychnis cognata plant was determined. LycMoV has a bipartite genome consisting of RNA1 (7,428 nt) and RNA2 (3,734 nt). Species in the family Secoviridae are demarcated based on their amino acid similarities in the protease-polymerase and coat protein. In LycMoV, these proteins share 90 \% and 63 \% sequence similarity, respectively, with the most closely related virus, strawberry latent ringspot virus, which is a member of the family Secoviridae but has not been assigned to a genus. Therefore, LycMoV is a tentative new virus of the family Secoviridae.",

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T1 - The complete nucleotide sequence and genome organization of lychnis mottle virus

AU - Yoo, Ran Hee

AU - Zhao, Fumei

AU - Lim, Seungmo

AU - Igori, Davaajargal

AU - Lee, Su Heon

AU - Moon, Jae Sun

PY - 2015/8/11

Y1 - 2015/8/11

N2 - The complete genomic sequence of lychnis mottle virus (LycMoV) from a Lychnis cognata plant was determined. LycMoV has a bipartite genome consisting of RNA1 (7,428 nt) and RNA2 (3,734 nt). Species in the family Secoviridae are demarcated based on their amino acid similarities in the protease-polymerase and coat protein. In LycMoV, these proteins share 90 % and 63 % sequence similarity, respectively, with the most closely related virus, strawberry latent ringspot virus, which is a member of the family Secoviridae but has not been assigned to a genus. Therefore, LycMoV is a tentative new virus of the family Secoviridae.

AB - The complete genomic sequence of lychnis mottle virus (LycMoV) from a Lychnis cognata plant was determined. LycMoV has a bipartite genome consisting of RNA1 (7,428 nt) and RNA2 (3,734 nt). Species in the family Secoviridae are demarcated based on their amino acid similarities in the protease-polymerase and coat protein. In LycMoV, these proteins share 90 % and 63 % sequence similarity, respectively, with the most closely related virus, strawberry latent ringspot virus, which is a member of the family Secoviridae but has not been assigned to a genus. Therefore, LycMoV is a tentative new virus of the family Secoviridae.

UR - https://www.scopus.com/pages/publications/84946491017

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DO - 10.1007/s00705-015-2501-4

M3 - Article

C2 - 26259831

AN - SCOPUS:84946491017

SN - 0304-8608

VL - 160

SP - 2891

EP - 2894

JO - Archives of Virology

JF - Archives of Virology

IS - 11

ER -

The complete nucleotide sequence and genome organization of lychnis mottle virus

Abstract

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