TY - JOUR
T1 - The complete plastid genome sequence of Bomarea edulis (Alstroemeriaceae: Liliales)
AU - Kim, Jung Sung
AU - Kim, Hyoung Tae
AU - Yoon, Chang Young
AU - Kim, Joo Hwan
PY - 2016/5/1
Y1 - 2016/5/1
N2 - Bomarea, a member of the family Alstroemeriaceae, is distributed from Chile to Mexico and includes approximately 120 species. Recent molecular phylogenetic studies have clarified the monophyly of the family within the order Liliales and the sister relationship with the family Colchicaceae. At this time, five plastid genomes of Liliales have been analyzed at the familial level. To examine plastid genome variation at the generic level, we sequenced the plastid genome of Bomarea edulis, which is the most widely distributed species in the genus, and compared it with Alstroemeria aurea. The plastid genome sequence of B. edulis was 154,925 bp in length with a similar structure as A. aurea, excluding the IR-LSC junction. Ycf68 and infA were pseudogenes caused by frameshift mutations, and the ycf15 gene was deleted, similar to A. aurea.
AB - Bomarea, a member of the family Alstroemeriaceae, is distributed from Chile to Mexico and includes approximately 120 species. Recent molecular phylogenetic studies have clarified the monophyly of the family within the order Liliales and the sister relationship with the family Colchicaceae. At this time, five plastid genomes of Liliales have been analyzed at the familial level. To examine plastid genome variation at the generic level, we sequenced the plastid genome of Bomarea edulis, which is the most widely distributed species in the genus, and compared it with Alstroemeria aurea. The plastid genome sequence of B. edulis was 154,925 bp in length with a similar structure as A. aurea, excluding the IR-LSC junction. Ycf68 and infA were pseudogenes caused by frameshift mutations, and the ycf15 gene was deleted, similar to A. aurea.
KW - Alstroemeriaceae
KW - bomare
KW - plastid genome
UR - http://www.scopus.com/inward/record.url?scp=85040690495&partnerID=8YFLogxK
U2 - 10.3109/19401736.2014.971264
DO - 10.3109/19401736.2014.971264
M3 - Article
C2 - 25319309
AN - SCOPUS:85040690495
SN - 2470-1394
VL - 27
SP - 1869
EP - 1870
JO - Mitochondrial DNA Part A: DNA Mapping, Sequencing, and Analysis
JF - Mitochondrial DNA Part A: DNA Mapping, Sequencing, and Analysis
IS - 3
ER -