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Transcriptome analysis and identification of regulators for long-term plasticity in Aplysia kurodai

  • Yong Seok Lee
  • , Sun Lim Choi
  • , Tae Hyung Kim
  • , Jin A. Lee
  • , Kyu Kim Hyong
  • , Hyoung Kim
  • , Deok Jin Jang
  • , Jennifer J. Lee
  • , Sunghoon Lee
  • , Sik Sin Gwang
  • , Chang Bae Kim
  • , Yutaka Suzuki
  • , Sumio Sugano
  • , Tai Kubo
  • , Leonid L. Moroz
  • , Eric R. Kandel
  • , Jong Bhak
  • , Bong Kiun Kaang
  • Seoul National University
  • Korean Bio Information Center (KOBIC)
  • Sangmyung University
  • The University of Tokyo
  • National Institute of Advanced Industrial Science and Technology
  • University of Florida
  • Columbia University

Research output: Contribution to journalArticlepeer-review

23 Scopus citations

Abstract

The marine mollusk Aplysia is a useful model organism for studying the cellular bases of behavior and plasticity. However, molecular studies of Aplysia have been limited by the lack of genomic information. Recently, a large scale characterization of neuronal transcripts was performed in A. californica. Here, we report the analysis of a parallel set of neuronal transcripts from a closely related species A. kurodai found in the northwestern Pacific. We collected 4,859 nonredundant sequences from the nervous system tissue of A. kurodai. By performing microarray and real-time PCR analyses, we found that ApC/EBP, matrilin, antistasin, and eIF3e clones were significantly up-regulated and a BAT1 homologous clone was significantly down-regulated by 5-HT treatment. Among these, we further demonstrated that the Ap-eIF3e plays a key role in 5-HT-induced long-term facilitation (LTF) as a positive regulator.

Original languageEnglish
Pages (from-to)18602-18607
Number of pages6
JournalProceedings of the National Academy of Sciences of the United States of America
Volume105
Issue number47
DOIs
StatePublished - 25 Nov 2008

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

  1. SDG 14 - Life Below Water
    SDG 14 Life Below Water

Keywords

  • Expressed sequence tag
  • Long-term facilitation

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